BLASTX nr result

ID: Coptis24_contig00034196 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034196
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002515026.1| steroid dehydrogenase, putative [Ricinus com...   137   7e-31
ref|XP_002515028.1| steroid dehydrogenase, putative [Ricinus com...   137   9e-31
gb|AAY23355.1| 3-ketoacyl-CoA reductase 2 [Gossypium hirsutum]        135   3e-30
ref|XP_004142956.1| PREDICTED: very-long-chain 3-oxoacyl-CoA red...   134   6e-30
ref|XP_002314573.1| predicted protein [Populus trichocarpa] gi|2...   134   6e-30

>ref|XP_002515026.1| steroid dehydrogenase, putative [Ricinus communis]
           gi|223546077|gb|EEF47580.1| steroid dehydrogenase,
           putative [Ricinus communis]
          Length = 331

 Score =  137 bits (346), Expect = 7e-31
 Identities = 73/132 (55%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   ALITGSTDGIGKAFAFELAKKGLNLILVGRNSNKLQTVSIEIHTLSPSIHIKIIVLDFAK 182
           ALITG+TDGIGKAFAF+LAK+GLNLILV RN NKL+TVS EI    PS  IKI+ LDF+ 
Sbjct: 56  ALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS 115

Query: 183 DLSNGIL-AIEEMVQEIDVGVLVNNVGVTYPKAAYFXXXXXXXXXXXXXXXXXGTTKVTR 359
           + S+G++  IEE ++ +DVGVL+NNVG+TYP+A +F                 GTT+VT 
Sbjct: 116 EDSSGLVHVIEEAIKGVDVGVLINNVGITYPQARFFDEVDESTWMSVVKVNVKGTTRVTE 175

Query: 360 AVIGEMLKRKRG 395
           AV+  M++R+RG
Sbjct: 176 AVLSGMIERRRG 187


>ref|XP_002515028.1| steroid dehydrogenase, putative [Ricinus communis]
           gi|223546079|gb|EEF47582.1| steroid dehydrogenase,
           putative [Ricinus communis]
          Length = 342

 Score =  137 bits (345), Expect = 9e-31
 Identities = 73/132 (55%), Positives = 95/132 (71%), Gaps = 1/132 (0%)
 Frame = +3

Query: 3   ALITGSTDGIGKAFAFELAKKGLNLILVGRNSNKLQTVSIEIHTLSPSIHIKIIVLDFAK 182
           ALITG+TDGIGKAFAF+LAK+GLNLILV RN NKL+TVS EI    PS  IKI+ LDF+ 
Sbjct: 56  ALITGATDGIGKAFAFQLAKQGLNLILVSRNLNKLKTVSSEIQEEFPSTKIKIMNLDFSS 115

Query: 183 DLSNGIL-AIEEMVQEIDVGVLVNNVGVTYPKAAYFXXXXXXXXXXXXXXXXXGTTKVTR 359
           + S+G++  IEE ++ +DVGVL+NNVG+TYP+A +F                 GTT+VT 
Sbjct: 116 EDSSGLVHVIEEAIKGVDVGVLINNVGITYPRARFFDEVDESTWMSIVKVNVEGTTRVTE 175

Query: 360 AVIGEMLKRKRG 395
           AV+  M++R+RG
Sbjct: 176 AVLPGMIERRRG 187


>gb|AAY23355.1| 3-ketoacyl-CoA reductase 2 [Gossypium hirsutum]
          Length = 307

 Score =  135 bits (340), Expect = 3e-30
 Identities = 72/131 (54%), Positives = 90/131 (68%)
 Frame = +3

Query: 3   ALITGSTDGIGKAFAFELAKKGLNLILVGRNSNKLQTVSIEIHTLSPSIHIKIIVLDFAK 182
           ALITG+TDGIGKAFA +LA++GLNLILV RN NKL+TVS EI    P + IK++  DF+ 
Sbjct: 46  ALITGATDGIGKAFANQLARQGLNLILVSRNLNKLKTVSAEIRAQFPHLKIKVVAQDFSG 105

Query: 183 DLSNGILAIEEMVQEIDVGVLVNNVGVTYPKAAYFXXXXXXXXXXXXXXXXXGTTKVTRA 362
           ++S G   IEE V+ ++VGVL+NNVG+TYP+A YF                 GTT VTRA
Sbjct: 106 NISAGAGLIEEAVKGVEVGVLINNVGITYPRAMYFHEVEEEVVKGIIRVNLKGTTWVTRA 165

Query: 363 VIGEMLKRKRG 395
           V+  ML RKRG
Sbjct: 166 VLPGMLNRKRG 176


>ref|XP_004142956.1| PREDICTED: very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis
           sativus] gi|449527051|ref|XP_004170526.1| PREDICTED:
           very-long-chain 3-oxoacyl-CoA reductase 1-like [Cucumis
           sativus]
          Length = 320

 Score =  134 bits (338), Expect = 6e-30
 Identities = 72/131 (54%), Positives = 88/131 (67%)
 Frame = +3

Query: 3   ALITGSTDGIGKAFAFELAKKGLNLILVGRNSNKLQTVSIEIHTLSPSIHIKIIVLDFAK 182
           AL+TG TDGIGK+FAF+LA+KGLNL+LVGRN  KL+ VS  I     SI IK +V+DF+ 
Sbjct: 56  ALVTGPTDGIGKSFAFQLARKGLNLVLVGRNPEKLKDVSDSIVAKYGSIQIKSVVVDFSG 115

Query: 183 DLSNGILAIEEMVQEIDVGVLVNNVGVTYPKAAYFXXXXXXXXXXXXXXXXXGTTKVTRA 362
           DLS GI  I E ++ +DVGVL+NNVGV+YP   +F                 GTTKVT A
Sbjct: 116 DLSEGIKRITEAIEGLDVGVLINNVGVSYPYGRFFHEVDEELLNNLIKVNVEGTTKVTHA 175

Query: 363 VIGEMLKRKRG 395
           V+  MLKRKRG
Sbjct: 176 VLPGMLKRKRG 186


>ref|XP_002314573.1| predicted protein [Populus trichocarpa] gi|222863613|gb|EEF00744.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  134 bits (338), Expect = 6e-30
 Identities = 68/131 (51%), Positives = 91/131 (69%)
 Frame = +3

Query: 3   ALITGSTDGIGKAFAFELAKKGLNLILVGRNSNKLQTVSIEIHTLSPSIHIKIIVLDFAK 182
           AL+TG TDGIGK FAF+LA+KGLNLILVGRN +KL+ VS  I +   ++ IK +V+DF+ 
Sbjct: 56  ALVTGPTDGIGKGFAFQLARKGLNLILVGRNPDKLKDVSTSIQSKYSNVQIKNVVVDFSG 115

Query: 183 DLSNGILAIEEMVQEIDVGVLVNNVGVTYPKAAYFXXXXXXXXXXXXXXXXXGTTKVTRA 362
           D+  G+  I+E V+ +DVG+L+NNVGV+YP A +F                 GTTKVT+A
Sbjct: 116 DIDEGVQKIKETVEGLDVGILINNVGVSYPYARFFHEVDEELLKHLIRVNVEGTTKVTQA 175

Query: 363 VIGEMLKRKRG 395
           V+  MLKRK+G
Sbjct: 176 VLPGMLKRKKG 186


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