BLASTX nr result

ID: Coptis24_contig00034194 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034194
         (307 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase ...   179   2e-43
ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyl...   176   2e-42
ref|XP_003531927.1| PREDICTED: homocysteine S-methyltransferase ...   175   3e-42
ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase ...   174   7e-42
gb|AEX97078.1| homocysteine s-methytransferase, partial [Malus x...   172   3e-41

>ref|XP_002282549.1| PREDICTED: homocysteine S-methyltransferase 1 [Vitis vinifera]
           gi|297737821|emb|CBI27022.3| unnamed protein product
           [Vitis vinifera]
          Length = 325

 Score =  179 bits (455), Expect = 2e-43
 Identities = 87/102 (85%), Positives = 94/102 (92%)
 Frame = +1

Query: 1   LADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLETQACLELLDEE 180
           LADGSEYSG YG D+NLDKLKDFHRRRLQVLV + PDLLAFETIPNKLE QAC+ELL+EE
Sbjct: 136 LADGSEYSGCYGPDMNLDKLKDFHRRRLQVLVRSCPDLLAFETIPNKLEAQACVELLEEE 195

Query: 181 DIQIPSWICFSSVDGEHAASGESFKECLDIINKSNKVNVVGI 306
           ++QIPSWICFSSVDGE+A SGESFKECLDIINKS KVN VGI
Sbjct: 196 NVQIPSWICFSSVDGENAPSGESFKECLDIINKSKKVNAVGI 237


>ref|XP_002531629.1| 5-methyltetrahydrofolate:homocysteine methyltransferase, putative
           [Ricinus communis] gi|223528747|gb|EEF30757.1|
           5-methyltetrahydrofolate:homocysteine methyltransferase,
           putative [Ricinus communis]
          Length = 327

 Score =  176 bits (445), Expect = 2e-42
 Identities = 84/102 (82%), Positives = 93/102 (91%)
 Frame = +1

Query: 1   LADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLETQACLELLDEE 180
           LADGSEYSG YG DVNL+KLKDFHR RLQVL EAGPDLLAFETIPNKLE +AC+ELL+EE
Sbjct: 138 LADGSEYSGYYGPDVNLEKLKDFHRHRLQVLAEAGPDLLAFETIPNKLEAEACVELLEEE 197

Query: 181 DIQIPSWICFSSVDGEHAASGESFKECLDIINKSNKVNVVGI 306
           +I+IPSWICFSSVDGE+A SGESF+ECLD+INKSNKV   GI
Sbjct: 198 NIKIPSWICFSSVDGENAPSGESFQECLDVINKSNKVVAAGI 239


>ref|XP_003531927.1| PREDICTED: homocysteine S-methyltransferase 1-like [Glycine max]
          Length = 323

 Score =  175 bits (444), Expect = 3e-42
 Identities = 83/102 (81%), Positives = 94/102 (92%)
 Frame = +1

Query: 1   LADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLETQACLELLDEE 180
           LADGSEYSG YG DVNL KLKDFHRRRLQVLVEAGPDLLAFETIPNKLE QAC+ELL+EE
Sbjct: 134 LADGSEYSGCYGPDVNLKKLKDFHRRRLQVLVEAGPDLLAFETIPNKLEAQACVELLEEE 193

Query: 181 DIQIPSWICFSSVDGEHAASGESFKECLDIINKSNKVNVVGI 306
            ++IPSWICF++VDGE+A SGESFK+CL+ +NKSNKV+ VGI
Sbjct: 194 SVKIPSWICFTTVDGENAPSGESFKDCLEALNKSNKVDAVGI 235


>ref|XP_004135092.1| PREDICTED: homocysteine S-methyltransferase 1-like [Cucumis
           sativus] gi|449493450|ref|XP_004159294.1| PREDICTED:
           homocysteine S-methyltransferase 1-like [Cucumis
           sativus]
          Length = 328

 Score =  174 bits (441), Expect = 7e-42
 Identities = 83/102 (81%), Positives = 93/102 (91%)
 Frame = +1

Query: 1   LADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLETQACLELLDEE 180
           LADGSEYSG YG DVN+DKLKDFHRRRLQ+ V+A PDLLAFETIPNKLE QAC+ELL+EE
Sbjct: 138 LADGSEYSGHYGPDVNVDKLKDFHRRRLQIFVDASPDLLAFETIPNKLEAQACVELLEEE 197

Query: 181 DIQIPSWICFSSVDGEHAASGESFKECLDIINKSNKVNVVGI 306
           +IQIPSWICFSSVDGE+A SGESF++CL  INKS+KVN VGI
Sbjct: 198 NIQIPSWICFSSVDGENAPSGESFEKCLYAINKSDKVNAVGI 239


>gb|AEX97078.1| homocysteine s-methytransferase, partial [Malus x domestica]
          Length = 324

 Score =  172 bits (435), Expect = 3e-41
 Identities = 81/102 (79%), Positives = 91/102 (89%)
 Frame = +1

Query: 1   LADGSEYSGRYGSDVNLDKLKDFHRRRLQVLVEAGPDLLAFETIPNKLETQACLELLDEE 180
           LADGSEYSG YG  V++DKLKDFHRRR QVLVEAGPDLLAFET PNKLE QACLELL+E+
Sbjct: 139 LADGSEYSGCYGPRVDVDKLKDFHRRRFQVLVEAGPDLLAFETFPNKLEAQACLELLEEQ 198

Query: 181 DIQIPSWICFSSVDGEHAASGESFKECLDIINKSNKVNVVGI 306
            +QIPSWICFSSVDGE+A SGE F ECL++INKSNK++ VGI
Sbjct: 199 SVQIPSWICFSSVDGENAPSGEGFTECLEVINKSNKIHAVGI 240


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