BLASTX nr result

ID: Coptis24_contig00034178 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034178
         (340 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003540507.1| PREDICTED: uncharacterized protein LOC100817...   157   6e-37
gb|AFK41428.1| unknown [Medicago truncatula]                          156   1e-36
ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|2...   156   2e-36
ref|XP_002283611.1| PREDICTED: uncharacterized protein LOC100250...   155   2e-36
ref|XP_003543193.1| PREDICTED: uncharacterized protein LOC100794...   155   3e-36

>ref|XP_003540507.1| PREDICTED: uncharacterized protein LOC100817531 [Glycine max]
          Length = 358

 Score =  157 bits (398), Expect = 6e-37
 Identities = 70/97 (72%), Positives = 81/97 (83%)
 Frame = +1

Query: 1   NGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSKPVYLLDVTTLSQLRK 180
           NGS W+EP+  +C+ +K PV GSTYPGG PPA+AVLK+VL T+ KPV LLD+TTLS LRK
Sbjct: 262 NGSLWNEPSATSCIRQKTPVPGSTYPGGLPPAVAVLKSVLSTIRKPVTLLDITTLSLLRK 321

Query: 181 DGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 291
           DGHPSIYGL G  GMDCSHWCL GVPDTWN+ILYN +
Sbjct: 322 DGHPSIYGLNGAAGMDCSHWCLPGVPDTWNEILYNLI 358


>gb|AFK41428.1| unknown [Medicago truncatula]
          Length = 353

 Score =  156 bits (395), Expect = 1e-36
 Identities = 69/97 (71%), Positives = 81/97 (83%)
 Frame = +1

Query: 1   NGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSKPVYLLDVTTLSQLRK 180
           NG+ W+EP+ K+C+ EK P+ GSTYPGG  PA+ VLK VL T+ KPV LLD+TTLS LRK
Sbjct: 257 NGTLWNEPSAKSCIREKTPLTGSTYPGGLQPAVGVLKGVLSTIKKPVTLLDITTLSLLRK 316

Query: 181 DGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 291
           DGHPSIYGL G +GMDCSHWCL+GVPDTWNQILYN +
Sbjct: 317 DGHPSIYGLFGSKGMDCSHWCLSGVPDTWNQILYNLI 353


>ref|XP_002317443.1| predicted protein [Populus trichocarpa] gi|222860508|gb|EEE98055.1|
           predicted protein [Populus trichocarpa]
          Length = 352

 Score =  156 bits (394), Expect = 2e-36
 Identities = 69/98 (70%), Positives = 80/98 (81%)
 Frame = +1

Query: 1   NGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSKPVYLLDVTTLSQLRK 180
           NG+ WDEP+ K+C  +KQPV GSTYPGG PP + VLK VL  ++KPV LLDVT LS LRK
Sbjct: 254 NGTLWDEPSAKSCAGQKQPVAGSTYPGGLPPPVEVLKGVLSKITKPVTLLDVTLLSLLRK 313

Query: 181 DGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNALL 294
           DGHPSIYGLGG  G+DCSHWCL GVPDTWN+ILYN ++
Sbjct: 314 DGHPSIYGLGGSTGLDCSHWCLPGVPDTWNEILYNLII 351


>ref|XP_002283611.1| PREDICTED: uncharacterized protein LOC100250342 [Vitis vinifera]
           gi|302142825|emb|CBI20120.3| unnamed protein product
           [Vitis vinifera]
          Length = 348

 Score =  155 bits (393), Expect = 2e-36
 Identities = 70/98 (71%), Positives = 78/98 (79%)
 Frame = +1

Query: 1   NGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSKPVYLLDVTTLSQLRK 180
           NG+ W EP  KNC+ EK+P+  STYPGG PPAL V K VL  + KPV LLDVT LS LRK
Sbjct: 251 NGTSWGEPGAKNCIHEKEPLLVSTYPGGLPPALGVQKGVLSKMKKPVVLLDVTNLSLLRK 310

Query: 181 DGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNALL 294
           DGHPS+YGLGG  GMDCSHWCLAGVPDTWN+ILYN +L
Sbjct: 311 DGHPSMYGLGGPTGMDCSHWCLAGVPDTWNEILYNLIL 348


>ref|XP_003543193.1| PREDICTED: uncharacterized protein LOC100794317 [Glycine max]
          Length = 344

 Score =  155 bits (392), Expect = 3e-36
 Identities = 69/97 (71%), Positives = 80/97 (82%)
 Frame = +1

Query: 1   NGSEWDEPNIKNCLIEKQPVKGSTYPGGSPPALAVLKNVLRTVSKPVYLLDVTTLSQLRK 180
           NGS W+EP + +C+ +K PV GS YPGG PPA+AVLK+VL T+ KPV LLD+TTLS LRK
Sbjct: 248 NGSLWNEPGVTSCVRQKTPVPGSIYPGGLPPAVAVLKSVLSTIRKPVTLLDITTLSLLRK 307

Query: 181 DGHPSIYGLGGQRGMDCSHWCLAGVPDTWNQILYNAL 291
           DGHPSIYGL G  GMDCSHWCL GVPDTWN+ILYN +
Sbjct: 308 DGHPSIYGLTGAAGMDCSHWCLPGVPDTWNEILYNLI 344


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