BLASTX nr result

ID: Coptis24_contig00034158 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034158
         (308 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002325024.1| predicted protein [Populus trichocarpa] gi|2...   164   7e-39
ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254...   163   2e-38
ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [...   154   9e-36
ref|XP_004157886.1| PREDICTED: uncharacterized protein C3F10.06c...   150   8e-35
ref|XP_004141018.1| PREDICTED: uncharacterized protein C3F10.06c...   150   8e-35

>ref|XP_002325024.1| predicted protein [Populus trichocarpa] gi|222866458|gb|EEF03589.1|
           predicted protein [Populus trichocarpa]
          Length = 503

 Score =  164 bits (415), Expect = 7e-39
 Identities = 76/102 (74%), Positives = 90/102 (88%)
 Frame = +2

Query: 2   LNCDSEAVSMCLPEADAYLHLPIVTSKFDRYSLLNNLQSAFNFAKLNLRKGKNLLVCCRT 181
           LNCD E VS+ LP+++A+LHLP+V+SK DR+SL NNL +A NFAKLNLRK   LLVCCR+
Sbjct: 369 LNCDKEPVSINLPDSEAHLHLPMVSSKLDRFSLFNNLPAAVNFAKLNLRKAHRLLVCCRS 428

Query: 182 GEDISICICLAILTSLFDDKGTYDDGKCFEETCISKLEMRRR 307
           GEDIS+CICLAILTSLFDDKGT+DDG+ F ETCI+KLEMRRR
Sbjct: 429 GEDISVCICLAILTSLFDDKGTFDDGRSFSETCITKLEMRRR 470


>ref|XP_002280444.1| PREDICTED: uncharacterized protein LOC100254132 [Vitis vinifera]
           gi|297738758|emb|CBI28003.3| unnamed protein product
           [Vitis vinifera]
          Length = 520

 Score =  163 bits (412), Expect = 2e-38
 Identities = 78/102 (76%), Positives = 86/102 (84%)
 Frame = +2

Query: 2   LNCDSEAVSMCLPEADAYLHLPIVTSKFDRYSLLNNLQSAFNFAKLNLRKGKNLLVCCRT 181
           LNC  E VS CLP A AYLHLPIV SK DR+SLL+NL SAFNFAK NL KGK+LLVCC  
Sbjct: 385 LNCHPELVSACLPNAIAYLHLPIVNSKLDRFSLLSNLPSAFNFAKSNLSKGKSLLVCCHN 444

Query: 182 GEDISICICLAILTSLFDDKGTYDDGKCFEETCISKLEMRRR 307
           GEDISIC+CLAILTSLF+D+GT+DDGK F ETCI+K EMRRR
Sbjct: 445 GEDISICVCLAILTSLFNDEGTFDDGKSFSETCITKWEMRRR 486


>ref|XP_003630717.1| tRNA A64-2'-O-ribosylphosphate transferase [Medicago truncatula]
           gi|355524739|gb|AET05193.1| tRNA
           A64-2'-O-ribosylphosphate transferase [Medicago
           truncatula]
          Length = 515

 Score =  154 bits (388), Expect = 9e-36
 Identities = 70/102 (68%), Positives = 85/102 (83%)
 Frame = +2

Query: 2   LNCDSEAVSMCLPEADAYLHLPIVTSKFDRYSLLNNLQSAFNFAKLNLRKGKNLLVCCRT 181
           LNCD E++++CLP ++AYLHLPIV SKFDR+SLLNNL  A +FAK NL +GK LLVCC  
Sbjct: 376 LNCDYESITVCLPSSEAYLHLPIVNSKFDRFSLLNNLPKAVSFAKFNLSQGKRLLVCCND 435

Query: 182 GEDISICICLAILTSLFDDKGTYDDGKCFEETCISKLEMRRR 307
           GEDISIC+CLAIL SLFD+KGT+DDGK F  T ++K +MRRR
Sbjct: 436 GEDISICVCLAILMSLFDEKGTFDDGKSFNTTHVTKWDMRRR 477


>ref|XP_004157886.1| PREDICTED: uncharacterized protein C3F10.06c-like [Cucumis sativus]
          Length = 520

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/102 (69%), Positives = 83/102 (81%)
 Frame = +2

Query: 2   LNCDSEAVSMCLPEADAYLHLPIVTSKFDRYSLLNNLQSAFNFAKLNLRKGKNLLVCCRT 181
           LNCD E +S+CLP A AYLHLP+V SK DR+SL  NL SA +FAKLNL +GK LLVCC  
Sbjct: 388 LNCDQETLSVCLPVASAYLHLPLVMSKMDRFSLSRNLASAVDFAKLNLNQGKRLLVCCSN 447

Query: 182 GEDISICICLAILTSLFDDKGTYDDGKCFEETCISKLEMRRR 307
           GEDISIC+CLAILTSLFD++GT+D GK F  T I+KLEM+RR
Sbjct: 448 GEDISICVCLAILTSLFDEEGTFDCGKSFNNTLITKLEMKRR 489


>ref|XP_004141018.1| PREDICTED: uncharacterized protein C3F10.06c-like [Cucumis sativus]
          Length = 520

 Score =  150 bits (380), Expect = 8e-35
 Identities = 71/102 (69%), Positives = 83/102 (81%)
 Frame = +2

Query: 2   LNCDSEAVSMCLPEADAYLHLPIVTSKFDRYSLLNNLQSAFNFAKLNLRKGKNLLVCCRT 181
           LNCD E +S+CLP A AYLHLP+V SK DR+SL  NL SA +FAKLNL +GK LLVCC  
Sbjct: 388 LNCDQETLSVCLPVASAYLHLPLVMSKLDRFSLSRNLASAVDFAKLNLNQGKRLLVCCSN 447

Query: 182 GEDISICICLAILTSLFDDKGTYDDGKCFEETCISKLEMRRR 307
           GEDISIC+CLAILTSLFD++GT+D GK F  T I+KLEM+RR
Sbjct: 448 GEDISICVCLAILTSLFDEEGTFDCGKSFNNTLITKLEMKRR 489


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