BLASTX nr result

ID: Coptis24_contig00034153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034153
         (232 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299540.1| heavy metal ATPase [Populus trichocarpa] gi|...   119   3e-25
ref|XP_002509783.1| copper-transporting atpase p-type, putative ...   115   3e-24
ref|XP_002303580.1| heavy metal ATPase [Populus trichocarpa] gi|...   113   1e-23
gb|AFM38009.1| HMA5-2, partial [Silene vulgaris]                      108   3e-22
ref|XP_002269839.1| PREDICTED: putative copper-transporting ATPa...   106   2e-21

>ref|XP_002299540.1| heavy metal ATPase [Populus trichocarpa]
           gi|222846798|gb|EEE84345.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 965

 Score =  119 bits (297), Expect = 3e-25
 Identities = 56/76 (73%), Positives = 64/76 (84%)
 Frame = +2

Query: 5   LQALPGVEAVDFDPTFQKVSLSYKPDQTGPRNYIQVIESMGYGRFKAMIDPEGGGKDSHR 184
           LQALPGV+++D D    K+SLSYKPD TGPRN+I+VIES G GRFKAMI PEGGG++SHR
Sbjct: 222 LQALPGVQSIDIDSEVNKISLSYKPDVTGPRNFIKVIESTGTGRFKAMIFPEGGGRESHR 281

Query: 185 KEEISQYRRSLLWSLV 232
           KEEI QY RS LWSLV
Sbjct: 282 KEEIKQYYRSFLWSLV 297


>ref|XP_002509783.1| copper-transporting atpase p-type, putative [Ricinus communis]
           gi|223549682|gb|EEF51170.1| copper-transporting atpase
           p-type, putative [Ricinus communis]
          Length = 987

 Score =  115 bits (289), Expect = 3e-24
 Identities = 56/77 (72%), Positives = 65/77 (84%), Gaps = 1/77 (1%)
 Frame = +2

Query: 5   LQALPGVEAVDFDPTFQKVSLSYKPDQTGPRNYIQVIESMGYGRFKAMIDPE-GGGKDSH 181
           LQALPGV+++D DP  +K SLSYKP+ TGPRN+I+VIES G GRFKAMI PE GGG++SH
Sbjct: 223 LQALPGVQSIDIDPELRKFSLSYKPEMTGPRNFIKVIESTGTGRFKAMIFPEGGGGRESH 282

Query: 182 RKEEISQYRRSLLWSLV 232
           RKEEI QY RS LWSLV
Sbjct: 283 RKEEIKQYYRSFLWSLV 299


>ref|XP_002303580.1| heavy metal ATPase [Populus trichocarpa]
           gi|222841012|gb|EEE78559.1| heavy metal ATPase [Populus
           trichocarpa]
          Length = 987

 Score =  113 bits (283), Expect = 1e-23
 Identities = 56/77 (72%), Positives = 63/77 (81%), Gaps = 1/77 (1%)
 Frame = +2

Query: 5   LQALPGVEAVDFDPTFQKVSLSYKPDQTGPRNYIQVIESMG-YGRFKAMIDPEGGGKDSH 181
           LQALPGV++VD DP   K+SLSYKPD TGPRN+I VIES G  GRFKA I PEGGG++SH
Sbjct: 223 LQALPGVQSVDIDPEVNKISLSYKPDVTGPRNFINVIESTGTSGRFKATIFPEGGGRESH 282

Query: 182 RKEEISQYRRSLLWSLV 232
           R+EEI QY RS LWSLV
Sbjct: 283 RQEEIKQYYRSFLWSLV 299


>gb|AFM38009.1| HMA5-2, partial [Silene vulgaris]
          Length = 421

 Score =  108 bits (271), Expect = 3e-22
 Identities = 50/76 (65%), Positives = 61/76 (80%)
 Frame = +2

Query: 5   LQALPGVEAVDFDPTFQKVSLSYKPDQTGPRNYIQVIESMGYGRFKAMIDPEGGGKDSHR 184
           LQALPGV+ VD D T  KVS++YKPD TGPR +I+VI+SMG G FKAMI PE  GKDSH+
Sbjct: 150 LQALPGVQTVDLDETLNKVSIAYKPDMTGPRTFIEVIDSMGSGSFKAMIYPEERGKDSHK 209

Query: 185 KEEISQYRRSLLWSLV 232
           +E+I QY RS +WSL+
Sbjct: 210 QEQIKQYYRSFVWSLI 225


>ref|XP_002269839.1| PREDICTED: putative copper-transporting ATPase 3-like [Vitis
           vinifera]
          Length = 984

 Score =  106 bits (265), Expect = 2e-21
 Identities = 53/76 (69%), Positives = 60/76 (78%)
 Frame = +2

Query: 5   LQALPGVEAVDFDPTFQKVSLSYKPDQTGPRNYIQVIESMGYGRFKAMIDPEGGGKDSHR 184
           L+ALPGV+ +D DPT +K SLSYKPD TGPRN I VIES G GR+KA I PE GG++ HR
Sbjct: 222 LRALPGVQDIDVDPTVRKFSLSYKPDVTGPRNLINVIESTGTGRYKAAISPE-GGREVHR 280

Query: 185 KEEISQYRRSLLWSLV 232
           KEEI QY RS LWSLV
Sbjct: 281 KEEIKQYYRSFLWSLV 296


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