BLASTX nr result

ID: Coptis24_contig00034138 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034138
         (354 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-...   144   6e-33
ref|XP_003518601.1| PREDICTED: trihelix transcription factor GT-...   138   4e-31
gb|AAL65125.1| GT-2 factor [Glycine max]                              138   4e-31
emb|CBI37606.3| unnamed protein product [Vitis vinifera]              137   7e-31
ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-...   137   7e-31

>ref|XP_002266195.1| PREDICTED: trihelix transcription factor GT-2-like [Vitis vinifera]
          Length = 576

 Score =  144 bits (364), Expect = 6e-33
 Identities = 72/115 (62%), Positives = 88/115 (76%), Gaps = 1/115 (0%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           PRQETLALLKIRSDMD+ F++S+LKGPLWE +SRKLAELGY RSAKKCKEKFEN++KYH+
Sbjct: 62  PRQETLALLKIRSDMDVTFRDSSLKGPLWEEVSRKLAELGYHRSAKKCKEKFENVFKYHR 121

Query: 174 RTKE-RAARVDGNPYRFSNQLEAIDSRPSLPPLSFEXXXXXXXXISTTVLNVTPT 13
           RTKE RA++ DG  YRF +QLEA++++PSL  L            +T  L   PT
Sbjct: 122 RTKEGRASKADGKTYRFFDQLEALETQPSLASLPHSKPPAPAVLAATMPLANLPT 176



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           P+ E  AL+++R+ +D+ ++E+  KGPLWE IS  + +LGY R+AK+CKEK+ENI KY K
Sbjct: 392 PKAEVQALIRLRTSLDVKYQENGPKGPLWEEISAGMRKLGYNRNAKRCKEKWENINKYFK 451

Query: 174 RTKE--RAARVDGNPYRFSNQLEAI 106
           + KE  +    D     + +QLEA+
Sbjct: 452 KVKESNKKRPEDSKTCPYFHQLEAL 476


>ref|XP_003518601.1| PREDICTED: trihelix transcription factor GT-2 [Glycine max]
          Length = 631

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/116 (58%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           PRQETLALLKIRSDMD+AF+++++KGPLWE +SRKLAELGY R+AKKCKEKFEN+YKYHK
Sbjct: 66  PRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHK 125

Query: 174 RTKE-RAARVDGNPYRFSNQLEAIDSRPSLPPLSFEXXXXXXXXISTTVLNVTPTN 10
           RTKE R+ + +G  YRF +QL+A+++ PS+  +             TT L  TP +
Sbjct: 126 RTKEGRSGKSEGKTYRFFDQLQALENNPSIHAMQ-SPTPTPSKPPQTTALLATPVS 180



 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 36/85 (42%), Positives = 57/85 (67%), Gaps = 2/85 (2%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           P+ E  AL+ +R+ ++  ++E+  KGPLWE IS  + ++GY R+AK+CKEK+ENI KY K
Sbjct: 456 PKMEVQALINLRTSLETKYQENGPKGPLWEEISALMRKMGYNRNAKRCKEKWENINKYFK 515

Query: 174 RTKERAAR--VDGNPYRFSNQLEAI 106
           + KE + +   D     + +QLEA+
Sbjct: 516 KVKESSKKRPEDSKTCPYFHQLEAL 540


>gb|AAL65125.1| GT-2 factor [Glycine max]
          Length = 256

 Score =  138 bits (348), Expect = 4e-31
 Identities = 68/116 (58%), Positives = 88/116 (75%), Gaps = 1/116 (0%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           PRQETLALLKIRSDMD+AF+++++KGPLWE +SRKLAELGY R+AKKCKEKFEN+YKYHK
Sbjct: 46  PRQETLALLKIRSDMDVAFRDASVKGPLWEEVSRKLAELGYHRNAKKCKEKFENVYKYHK 105

Query: 174 RTKE-RAARVDGNPYRFSNQLEAIDSRPSLPPLSFEXXXXXXXXISTTVLNVTPTN 10
           RTKE R+ + +G  YRF +QL+A+++ PS+  +             TT L  TP +
Sbjct: 106 RTKEGRSGKSEGKTYRFFDQLQALENNPSIHAMQ-SPTPTPSKPPQTTALLATPVS 160


>emb|CBI37606.3| unnamed protein product [Vitis vinifera]
          Length = 539

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           PR+ETLALLKIRSDMD+ F++S+LK PLWE +SRKL ELGY R+AKKCKEKFENI+KYHK
Sbjct: 69  PREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAKKCKEKFENIFKYHK 128

Query: 174 RTKE-RAARVDGNPYRFSNQLEAIDSRPSLPPLS 76
           RTKE R+ R +G  YRF  QLEA+D+ P +PP S
Sbjct: 129 RTKEGRSNRQNGKNYRFFEQLEALDNHPLMPPPS 162



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           P+ E  AL+++R++ D+ ++ES  KGPLWE IS  + ++GY RSAK+CKEK+ENI KY K
Sbjct: 309 PKAEVEALIRLRTNFDMQYQESGPKGPLWEEISLAMRKIGYERSAKRCKEKWENINKYFK 368

Query: 174 RTKERAAR--VDGNPYRFSNQLEAI 106
           R ++   R   D     + +QL+A+
Sbjct: 369 RVRDSNKRRPEDSKTCPYFHQLDAL 393


>ref|XP_002276933.1| PREDICTED: trihelix transcription factor GT-2 [Vitis vinifera]
          Length = 510

 Score =  137 bits (346), Expect = 7e-31
 Identities = 66/94 (70%), Positives = 79/94 (84%), Gaps = 1/94 (1%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           PR+ETLALLKIRSDMD+ F++S+LK PLWE +SRKL ELGY R+AKKCKEKFENI+KYHK
Sbjct: 53  PREETLALLKIRSDMDVVFRDSSLKAPLWEEVSRKLGELGYHRNAKKCKEKFENIFKYHK 112

Query: 174 RTKE-RAARVDGNPYRFSNQLEAIDSRPSLPPLS 76
           RTKE R+ R +G  YRF  QLEA+D+ P +PP S
Sbjct: 113 RTKEGRSNRQNGKNYRFFEQLEALDNHPLMPPPS 146



 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 38/85 (44%), Positives = 58/85 (68%), Gaps = 2/85 (2%)
 Frame = -1

Query: 354 PRQETLALLKIRSDMDIAFKESTLKGPLWEAISRKLAELGYCRSAKKCKEKFENIYKYHK 175
           P+ E  AL+++R++ D+ ++ES  KGPLWE IS  + ++GY RSAK+CKEK+ENI KY K
Sbjct: 329 PKAEVEALIRLRTNFDMQYQESGPKGPLWEEISLAMRKIGYERSAKRCKEKWENINKYFK 388

Query: 174 RTKERAAR--VDGNPYRFSNQLEAI 106
           R ++   R   D     + +QL+A+
Sbjct: 389 RVRDSNKRRPEDSKTCPYFHQLDAL 413


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