BLASTX nr result
ID: Coptis24_contig00034136
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034136 (256 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI19594.3| unnamed protein product [Vitis vinifera] 127 1e-27 ref|XP_002282153.1| PREDICTED: probable transcription factor KAN... 127 1e-27 ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus c... 116 2e-24 ref|XP_002301209.1| predicted protein [Populus trichocarpa] gi|2... 111 5e-23 ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|2... 110 9e-23 >emb|CBI19594.3| unnamed protein product [Vitis vinifera] Length = 287 Score = 127 bits (318), Expect = 1e-27 Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LSLGIERESLISPLLMPPQRNLHYLHHLHHPQMYGHEFKRNSRG-NGGKRSIRAPRMRWT 177 LSLG+E +L P L P RNLH+ HH H PQ+YG EFKRNSR NG KRSIRAPRMRWT Sbjct: 34 LSLGLEMAALNPPPLELP-RNLHHNHHNHQPQIYGREFKRNSRMMNGSKRSIRAPRMRWT 92 Query: 178 STLHAHFVHAVELLGGHERATPKSVL 255 +TLHAHFVHAV+LLGGHERATPKSVL Sbjct: 93 TTLHAHFVHAVQLLGGHERATPKSVL 118 >ref|XP_002282153.1| PREDICTED: probable transcription factor KAN4-like [Vitis vinifera] Length = 338 Score = 127 bits (318), Expect = 1e-27 Identities = 65/86 (75%), Positives = 71/86 (82%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LSLGIERESLISPLLMPPQRNLHYLHHLHHPQMYGHEFKRNSRG-NGGKRSIRAPRMRWT 177 LSLG+E +L P L P RNLH+ HH H PQ+YG EFKRNSR NG KRSIRAPRMRWT Sbjct: 76 LSLGLEMAALNPPPLELP-RNLHHNHHNHQPQIYGREFKRNSRMMNGSKRSIRAPRMRWT 134 Query: 178 STLHAHFVHAVELLGGHERATPKSVL 255 +TLHAHFVHAV+LLGGHERATPKSVL Sbjct: 135 TTLHAHFVHAVQLLGGHERATPKSVL 160 >ref|XP_002510296.1| hypothetical protein RCOM_1592640 [Ricinus communis] gi|223550997|gb|EEF52483.1| hypothetical protein RCOM_1592640 [Ricinus communis] Length = 347 Score = 116 bits (291), Expect = 2e-24 Identities = 59/86 (68%), Positives = 68/86 (79%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LSLGIERESLISPLLMPPQRNLHYLHHLHHPQMYGHEFKRNSRG-NGGKRSIRAPRMRWT 177 LSLG E + +P + RNL++ HH H PQ+YG EFKRN R +G KRSIRAPRMRWT Sbjct: 89 LSLGFEMADMTTPPALQLPRNLNHHHH-HQPQIYGREFKRNGRMISGVKRSIRAPRMRWT 147 Query: 178 STLHAHFVHAVELLGGHERATPKSVL 255 +TLHAHFVHAV+LLGGHERATPKSVL Sbjct: 148 TTLHAHFVHAVQLLGGHERATPKSVL 173 >ref|XP_002301209.1| predicted protein [Populus trichocarpa] gi|222842935|gb|EEE80482.1| predicted protein [Populus trichocarpa] Length = 193 Score = 111 bits (278), Expect = 5e-23 Identities = 58/86 (67%), Positives = 70/86 (81%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LSLGIERESLISPLLMPPQRNLHYLHHLHHPQMYGHEFKRNSRG-NGGKRSIRAPRMRWT 177 LSLG + L SP P RNL++LHH H+PQ+YG +FKR++R +G +RS RAPRMRWT Sbjct: 77 LSLGFDMADLSSPSFQLP-RNLNHLHH-HNPQIYGGDFKRSARMISGVRRSKRAPRMRWT 134 Query: 178 STLHAHFVHAVELLGGHERATPKSVL 255 +TLHAHFVHAV+LLGGHERATPKSVL Sbjct: 135 TTLHAHFVHAVQLLGGHERATPKSVL 160 >ref|XP_002327097.1| predicted protein [Populus trichocarpa] gi|222835412|gb|EEE73847.1| predicted protein [Populus trichocarpa] Length = 293 Score = 110 bits (276), Expect = 9e-23 Identities = 59/86 (68%), Positives = 66/86 (76%), Gaps = 1/86 (1%) Frame = +1 Query: 1 LSLGIERESLISPLLMPPQRNLHYLHHLHHPQMYGHEFKRNSRG-NGGKRSIRAPRMRWT 177 LSLG + L S L P RNL+ HH H PQ+YG FKR++R NG KRS+RAPRMRWT Sbjct: 74 LSLGFDMADLSSQTLQLP-RNLN--HHHHQPQIYGRNFKRSARMINGVKRSVRAPRMRWT 130 Query: 178 STLHAHFVHAVELLGGHERATPKSVL 255 +TLHAHFVHAV LLGGHERATPKSVL Sbjct: 131 TTLHAHFVHAVRLLGGHERATPKSVL 156