BLASTX nr result

ID: Coptis24_contig00034122 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034122
         (258 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAF22901.1|AC006932_18 T27G7.16 [Arabidopsis thaliana]              80   2e-13
ref|NP_563818.1| strictosidine synthase-like 3 [Arabidopsis thal...    80   2e-13
ref|XP_002298158.1| predicted protein [Populus trichocarpa] gi|2...    79   3e-13
ref|XP_002892459.1| strictosidine synthase family protein [Arabi...    78   7e-13
ref|XP_002278142.1| PREDICTED: adipocyte plasma membrane-associa...    75   7e-12

>gb|AAF22901.1|AC006932_18 T27G7.16 [Arabidopsis thaliana]
          Length = 421

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 32/49 (65%), Positives = 43/49 (87%)
 Frame = +3

Query: 6   LFLLFSLYCATDPLKHSSVSKYPDFEAYKVDLPPWSALPKERDGENLLQ 152
           +FL+F++YCA DP  HSS+SK+PDF+ YK+D+PP S+LPKERD +NLLQ
Sbjct: 9   IFLVFAIYCAIDPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRQNLLQ 57


>ref|NP_563818.1| strictosidine synthase-like 3 [Arabidopsis thaliana]
           gi|16930481|gb|AAL31926.1|AF419594_1 At1g08470/T27G7_9
           [Arabidopsis thaliana] gi|17381182|gb|AAL36403.1|
           unknown protein [Arabidopsis thaliana]
           gi|21436203|gb|AAM51389.1| unknown protein [Arabidopsis
           thaliana] gi|332190175|gb|AEE28296.1| strictosidine
           synthase-like 3 [Arabidopsis thaliana]
          Length = 390

 Score = 80.1 bits (196), Expect = 2e-13
 Identities = 32/49 (65%), Positives = 43/49 (87%)
 Frame = +3

Query: 6   LFLLFSLYCATDPLKHSSVSKYPDFEAYKVDLPPWSALPKERDGENLLQ 152
           +FL+F++YCA DP  HSS+SK+PDF+ YK+D+PP S+LPKERD +NLLQ
Sbjct: 9   IFLVFAIYCAIDPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRQNLLQ 57


>ref|XP_002298158.1| predicted protein [Populus trichocarpa] gi|222845416|gb|EEE82963.1|
           predicted protein [Populus trichocarpa]
          Length = 391

 Score = 79.3 bits (194), Expect = 3e-13
 Identities = 34/54 (62%), Positives = 43/54 (79%)
 Frame = +3

Query: 6   LFLLFSLYCATDPLKHSSVSKYPDFEAYKVDLPPWSALPKERDGENLLQRERRK 167
           LFLL +LYC  DP K S++S +PDF++YKV++PPWS LPKE+D ENLLQR   K
Sbjct: 10  LFLLLTLYCGIDPWKQSAISGFPDFKSYKVEMPPWSILPKEKDEENLLQRSEIK 63


>ref|XP_002892459.1| strictosidine synthase family protein [Arabidopsis lyrata subsp.
           lyrata] gi|297338301|gb|EFH68718.1| strictosidine
           synthase family protein [Arabidopsis lyrata subsp.
           lyrata]
          Length = 390

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 32/47 (68%), Positives = 41/47 (87%)
 Frame = +3

Query: 12  LLFSLYCATDPLKHSSVSKYPDFEAYKVDLPPWSALPKERDGENLLQ 152
           L+F++YCA DP  HSS+SK+PDF+ YK+D+PP S+LPKERD ENLLQ
Sbjct: 11  LVFAIYCALDPFSHSSISKFPDFKTYKIDMPPLSSLPKERDRENLLQ 57


>ref|XP_002278142.1| PREDICTED: adipocyte plasma membrane-associated protein-like
           isoform 4 [Vitis vinifera]
          Length = 369

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 31/55 (56%), Positives = 42/55 (76%)
 Frame = +3

Query: 3   ALFLLFSLYCATDPLKHSSVSKYPDFEAYKVDLPPWSALPKERDGENLLQRERRK 167
           ALFLL +LYC  DPLKHSS++ +P+FEA+ V++PPWS +P  +D  NLLQ+   K
Sbjct: 9   ALFLLLALYCGIDPLKHSSIANFPEFEAHLVEMPPWSEVPAAKDDRNLLQKAEIK 63


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