BLASTX nr result

ID: Coptis24_contig00034115 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034115
         (463 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatu...   154   7e-36
ref|XP_002534042.1| conserved hypothetical protein [Ricinus comm...   152   4e-35
ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [C...   151   5e-35
ref|XP_004135016.1| PREDICTED: transmembrane protein 63B-like [C...   151   5e-35
ref|XP_002869054.1| hypothetical protein ARALYDRAFT_491051 [Arab...   149   3e-34

>ref|XP_003629245.1| Transmembrane protein 63C [Medicago truncatula]
           gi|355523267|gb|AET03721.1| Transmembrane protein 63C
           [Medicago truncatula]
          Length = 887

 Score =  154 bits (389), Expect = 7e-36
 Identities = 77/118 (65%), Positives = 90/118 (76%), Gaps = 5/118 (4%)
 Frame = -2

Query: 342 PPPSNEDDPT----WYGNIQYLLNISAIGSLTCXXXXXXXXXKSDHR-MPGPTALLSKLL 178
           PPPS+ DD      WYGNI YLLNISAIG+L C         +SDHR MPGP+A+ SKLL
Sbjct: 7   PPPSSGDDGDPIGLWYGNIDYLLNISAIGALFCLLIFLLVKLRSDHRRMPGPSAIASKLL 66

Query: 177 AVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMDDQ 4
           AVWHATGREIA HCGADAAQFLLIEGGSC +LL++A  A+ +LLP+NL+AG   +DDQ
Sbjct: 67  AVWHATGREIARHCGADAAQFLLIEGGSCAVLLAVAALALVVLLPVNLHAGTGVLDDQ 124


>ref|XP_002534042.1| conserved hypothetical protein [Ricinus communis]
           gi|223525949|gb|EEF28346.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 807

 Score =  152 bits (383), Expect = 4e-35
 Identities = 78/117 (66%), Positives = 89/117 (76%), Gaps = 2/117 (1%)
 Frame = -2

Query: 348 SSPPPSNEDDP-TWYGNIQYLLNISAIGSLTCXXXXXXXXXKSDHR-MPGPTALLSKLLA 175
           SS   S+ D P +WYGNIQYLLNIS IG L C         +SDHR +PGP+AL+SKLLA
Sbjct: 13  SSSGDSDSDIPNSWYGNIQYLLNISTIGLLFCIFIFIFVKLRSDHRRIPGPSALISKLLA 72

Query: 174 VWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMDDQ 4
           VWHATGREIA HCGADAAQFL+IEGGS  +LL IA  +IC +LPLNLYAG A +DDQ
Sbjct: 73  VWHATGREIARHCGADAAQFLIIEGGSFAVLLGIAVLSICFVLPLNLYAGTAVLDDQ 129


>ref|XP_004166972.1| PREDICTED: transmembrane protein 63B-like [Cucumis sativus]
          Length = 809

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/122 (61%), Positives = 93/122 (76%), Gaps = 7/122 (5%)
 Frame = -2

Query: 348 SSPPPSNEDD------PTWYGNIQYLLNISAIGSLTCXXXXXXXXXKSDHR-MPGPTALL 190
           SSPPPS++D        +WYGNI+YLLNIS IG+ +C         +SDHR +PGP+ L+
Sbjct: 12  SSPPPSSDDGGSSSDVTSWYGNIEYLLNISMIGAFSCLFIFLFVKLRSDHRRIPGPSGLV 71

Query: 189 SKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMD 10
           +KLLAVWHAT R+IA HCGADAAQFLLIEGGSC +LLSIA  ++ +LLPLNLYAG A ++
Sbjct: 72  TKLLAVWHATCRDIARHCGADAAQFLLIEGGSCAVLLSIAVLSVSVLLPLNLYAGKAVLN 131

Query: 9   DQ 4
           DQ
Sbjct: 132 DQ 133


>ref|XP_004135016.1| PREDICTED: transmembrane protein 63B-like [Cucumis sativus]
          Length = 809

 Score =  151 bits (382), Expect = 5e-35
 Identities = 75/122 (61%), Positives = 93/122 (76%), Gaps = 7/122 (5%)
 Frame = -2

Query: 348 SSPPPSNEDD------PTWYGNIQYLLNISAIGSLTCXXXXXXXXXKSDHR-MPGPTALL 190
           SSPPPS++D        +WYGNI+YLLNIS IG+ +C         +SDHR +PGP+ L+
Sbjct: 12  SSPPPSSDDGGSSSDVTSWYGNIEYLLNISMIGAFSCLFIFLFVKLRSDHRRIPGPSGLV 71

Query: 189 SKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMD 10
           +KLLAVWHAT R+IA HCGADAAQFLLIEGGSC +LLSIA  ++ +LLPLNLYAG A ++
Sbjct: 72  TKLLAVWHATCRDIARHCGADAAQFLLIEGGSCAVLLSIAVLSVSVLLPLNLYAGKAVLN 131

Query: 9   DQ 4
           DQ
Sbjct: 132 DQ 133


>ref|XP_002869054.1| hypothetical protein ARALYDRAFT_491051 [Arabidopsis lyrata subsp.
           lyrata] gi|297314890|gb|EFH45313.1| hypothetical protein
           ARALYDRAFT_491051 [Arabidopsis lyrata subsp. lyrata]
          Length = 802

 Score =  149 bits (375), Expect = 3e-34
 Identities = 79/123 (64%), Positives = 89/123 (72%), Gaps = 5/123 (4%)
 Frame = -2

Query: 354 DYSSPPPSNEDDP----TWYGNIQYLLNISAIGSLTCXXXXXXXXXKSDHR-MPGPTALL 190
           D  SPPPS+ D P     WYGNIQYLLNIS IG L C         +SDHR MPGP+AL 
Sbjct: 5   DSFSPPPSSGDLPEIPDAWYGNIQYLLNISVIGLLCCVSIFLFVKLRSDHRRMPGPSALF 64

Query: 189 SKLLAVWHATGREIASHCGADAAQFLLIEGGSCVILLSIAFFAICLLLPLNLYAGNATMD 10
           SKLLAVW AT REIA HCGADAAQFLLIEGGS V+L SIA  A+ ++LPLNLYAG A + 
Sbjct: 65  SKLLAVWKATCREIARHCGADAAQFLLIEGGSFVLLFSIAVLAVSVMLPLNLYAGTALLS 124

Query: 9   DQI 1
           D++
Sbjct: 125 DEL 127


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