BLASTX nr result

ID: Coptis24_contig00034109 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034109
         (372 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631702.1| PREDICTED: uncharacterized protein LOC100256...   112   2e-23
emb|CBI25088.3| unnamed protein product [Vitis vinifera]              112   2e-23
emb|CAN78688.1| hypothetical protein VITISV_006073 [Vitis vinifera]   112   2e-23
ref|XP_002313938.1| predicted protein [Populus trichocarpa] gi|2...   111   7e-23
ref|XP_002883836.1| hypothetical protein ARALYDRAFT_480347 [Arab...   110   2e-22

>ref|XP_003631702.1| PREDICTED: uncharacterized protein LOC100256594 [Vitis vinifera]
          Length = 407

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = +3

Query: 153 PCDYTDGSWIYDPTPTPISTITRYDNTCKEIFKGWNCISNNKSNAPEITKWRWKPTRCNL 332
           PCDY+DG WIYDP+         YD+TCKEIFKGWNCI++NKSN  +I KW WKP  C+L
Sbjct: 71  PCDYSDGMWIYDPSVRSAP----YDHTCKEIFKGWNCIASNKSNGLDIIKWHWKPKGCDL 126

Query: 333 PRFDPVLFLQRFR 371
           PRFDPV FL+RFR
Sbjct: 127 PRFDPVRFLERFR 139


>emb|CBI25088.3| unnamed protein product [Vitis vinifera]
          Length = 217

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = +3

Query: 153 PCDYTDGSWIYDPTPTPISTITRYDNTCKEIFKGWNCISNNKSNAPEITKWRWKPTRCNL 332
           PCDY+DG WIYDP+         YD+TCKEIFKGWNCI++NKSN  +I KW WKP  C+L
Sbjct: 71  PCDYSDGMWIYDPSVRSAP----YDHTCKEIFKGWNCIASNKSNGLDIIKWHWKPKGCDL 126

Query: 333 PRFDPVLFLQRFR 371
           PRFDPV FL+RFR
Sbjct: 127 PRFDPVRFLERFR 139


>emb|CAN78688.1| hypothetical protein VITISV_006073 [Vitis vinifera]
          Length = 422

 Score =  112 bits (281), Expect = 2e-23
 Identities = 48/73 (65%), Positives = 56/73 (76%)
 Frame = +3

Query: 153 PCDYTDGSWIYDPTPTPISTITRYDNTCKEIFKGWNCISNNKSNAPEITKWRWKPTRCNL 332
           PCDY+DG WIYDP+         YD+TCKEIFKGWNCI++NKSN  +I KW WKP  C+L
Sbjct: 71  PCDYSDGMWIYDPSVRSAP----YDHTCKEIFKGWNCIASNKSNGLDIIKWHWKPKGCDL 126

Query: 333 PRFDPVLFLQRFR 371
           PRFDPV FL+RFR
Sbjct: 127 PRFDPVRFLERFR 139


>ref|XP_002313938.1| predicted protein [Populus trichocarpa] gi|222850346|gb|EEE87893.1|
           predicted protein [Populus trichocarpa]
          Length = 407

 Score =  111 bits (277), Expect = 7e-23
 Identities = 48/74 (64%), Positives = 56/74 (75%)
 Frame = +3

Query: 150 TPCDYTDGSWIYDPTPTPISTITRYDNTCKEIFKGWNCISNNKSNAPEITKWRWKPTRCN 329
           TPC+Y+ GSWIYDP   P     +YD+TCKEIFKGWNCI+ NKSNA +I KWRW+P  C+
Sbjct: 55  TPCNYSHGSWIYDPNWIP----NKYDSTCKEIFKGWNCIAGNKSNAKDIIKWRWQPNGCD 110

Query: 330 LPRFDPVLFLQRFR 371
           LP  DPV FLQ FR
Sbjct: 111 LPPSDPVRFLQTFR 124


>ref|XP_002883836.1| hypothetical protein ARALYDRAFT_480347 [Arabidopsis lyrata subsp.
           lyrata] gi|297329676|gb|EFH60095.1| hypothetical protein
           ARALYDRAFT_480347 [Arabidopsis lyrata subsp. lyrata]
          Length = 411

 Score =  110 bits (274), Expect = 2e-22
 Identities = 47/72 (65%), Positives = 54/72 (75%)
 Frame = +3

Query: 156 CDYTDGSWIYDPTPTPISTITRYDNTCKEIFKGWNCISNNKSNAPEITKWRWKPTRCNLP 335
           CD++DGSWIYDP P      TRY + CKEIFKGWNCI NNK+N  EI+KWRWKP  C+LP
Sbjct: 62  CDFSDGSWIYDPNPRS----TRYTSNCKEIFKGWNCIRNNKTNGLEISKWRWKPKDCDLP 117

Query: 336 RFDPVLFLQRFR 371
            FDP+ FLQ  R
Sbjct: 118 SFDPLKFLQTHR 129


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