BLASTX nr result

ID: Coptis24_contig00034108 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034108
         (558 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti...    85   7e-15
ref|NP_001052191.1| Os04g0185100 [Oryza sativa Japonica Group] g...    73   3e-11
gb|EAZ29900.1| hypothetical protein OsJ_13954 [Oryza sativa Japo...    73   3e-11
gb|EAY93202.1| hypothetical protein OsI_15007 [Oryza sativa Indi...    73   3e-11
emb|CAH65885.1| OSIGBa0148J22.4 [Oryza sativa Indica Group] gi|1...    71   1e-10

>ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera]
          Length = 646

 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 3/186 (1%)
 Frame = -3

Query: 550 KIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPVPV 371
           K+ SG S+L K+FR RLL+F K  PE  EIP   LPEPF+   Q+    + ++  S +P 
Sbjct: 268 KLESGNSHLRKIFRARLLDFAKAHPEGDEIPEETLPEPFSQSKQDLHSNMIKDSYSSLPA 327

Query: 370 HSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFP---ESEKTGMLSTTHKHLSHSEEARSS 200
            +S +   +Q    ASHLS+ F+ RFSQK S      ++K    S     L   +   + 
Sbjct: 328 ETSCDVLMEQPQAVASHLSRCFQRRFSQKISGEAENSNKKPANFSLQLSDLPVQDPYLNK 387

Query: 199 VATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKV 20
            ++    + T+    +   S  +LP   P     ++T+   ++D+   +    + TPAK+
Sbjct: 388 SSSNEEVVATVAPSPVKSSSPAHLPLSHPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKL 447

Query: 19  VSTPAK 2
             +PA+
Sbjct: 448 AFSPAR 453


>ref|NP_001052191.1| Os04g0185100 [Oryza sativa Japonica Group]
           gi|38344618|emb|CAE02517.2| OSJNBb0003A12.4 [Oryza
           sativa Japonica Group] gi|38347086|emb|CAD39469.2|
           OSJNBa0001M07.6 [Oryza sativa Japonica Group]
           gi|113563762|dbj|BAF14105.1| Os04g0185100 [Oryza sativa
           Japonica Group] gi|215767412|dbj|BAG99640.1| unnamed
           protein product [Oryza sativa Japonica Group]
          Length = 588

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 54/185 (29%), Positives = 84/185 (45%)
 Frame = -3

Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377
           K K  +GYS L ++FR RL+++ ++ PE  +IP  ELP PF     ++   ++E+    V
Sbjct: 231 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 290

Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197
                S++T +Q  VA SH+  SFK  FSQ+S                  + +  A +S 
Sbjct: 291 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 331

Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17
            +  SK++      L   S +  P    V    E     K  + +  +   SE TPAK  
Sbjct: 332 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 391

Query: 16  STPAK 2
           STP +
Sbjct: 392 STPVR 396


>gb|EAZ29900.1| hypothetical protein OsJ_13954 [Oryza sativa Japonica Group]
          Length = 567

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 54/185 (29%), Positives = 84/185 (45%)
 Frame = -3

Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377
           K K  +GYS L ++FR RL+++ ++ PE  +IP  ELP PF     ++   ++E+    V
Sbjct: 210 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 269

Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197
                S++T +Q  VA SH+  SFK  FSQ+S                  + +  A +S 
Sbjct: 270 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 310

Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17
            +  SK++      L   S +  P    V    E     K  + +  +   SE TPAK  
Sbjct: 311 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 370

Query: 16  STPAK 2
           STP +
Sbjct: 371 STPVR 375


>gb|EAY93202.1| hypothetical protein OsI_15007 [Oryza sativa Indica Group]
          Length = 585

 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 54/185 (29%), Positives = 84/185 (45%)
 Frame = -3

Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377
           K K  +GYS L ++FR RL+++ ++ PE  +IP  ELP PF     ++   ++E+    V
Sbjct: 228 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 287

Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197
                S++T +Q  VA SH+  SFK  FSQ+S                  + +  A +S 
Sbjct: 288 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 328

Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17
            +  SK++      L   S +  P    V    E     K  + +  +   SE TPAK  
Sbjct: 329 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 388

Query: 16  STPAK 2
           STP +
Sbjct: 389 STPVR 393


>emb|CAH65885.1| OSIGBa0148J22.4 [Oryza sativa Indica Group]
           gi|116317863|emb|CAH65893.1| OSIGBa0132G14.1 [Oryza
           sativa Indica Group]
          Length = 582

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 53/185 (28%), Positives = 83/185 (44%)
 Frame = -3

Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377
           K K  +GYS L ++FR RL+++ ++ PE  +IP  ELP PF     ++   ++E+    V
Sbjct: 225 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 284

Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197
                S++T +Q  VA SH+  S K  FSQ+S                  + +  A +S 
Sbjct: 285 SALPLSSATDRQ-PVAMSHMPNSLKRMFSQRS------------------AAAAAATTST 325

Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17
            +  SK++      L   S +  P    V    E     K  + +  +   SE TPAK  
Sbjct: 326 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 385

Query: 16  STPAK 2
           STP +
Sbjct: 386 STPVR 390


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