BLASTX nr result
ID: Coptis24_contig00034108
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00034108 (558 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplasti... 85 7e-15 ref|NP_001052191.1| Os04g0185100 [Oryza sativa Japonica Group] g... 73 3e-11 gb|EAZ29900.1| hypothetical protein OsJ_13954 [Oryza sativa Japo... 73 3e-11 gb|EAY93202.1| hypothetical protein OsI_15007 [Oryza sativa Indi... 73 3e-11 emb|CAH65885.1| OSIGBa0148J22.4 [Oryza sativa Indica Group] gi|1... 71 1e-10 >ref|XP_002263743.1| PREDICTED: CDT1-like protein a, chloroplastic-like [Vitis vinifera] Length = 646 Score = 85.1 bits (209), Expect = 7e-15 Identities = 56/186 (30%), Positives = 92/186 (49%), Gaps = 3/186 (1%) Frame = -3 Query: 550 KIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPVPV 371 K+ SG S+L K+FR RLL+F K PE EIP LPEPF+ Q+ + ++ S +P Sbjct: 268 KLESGNSHLRKIFRARLLDFAKAHPEGDEIPEETLPEPFSQSKQDLHSNMIKDSYSSLPA 327 Query: 370 HSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFP---ESEKTGMLSTTHKHLSHSEEARSS 200 +S + +Q ASHLS+ F+ RFSQK S ++K S L + + Sbjct: 328 ETSCDVLMEQPQAVASHLSRCFQRRFSQKISGEAENSNKKPANFSLQLSDLPVQDPYLNK 387 Query: 199 VATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKV 20 ++ + T+ + S +LP P ++T+ ++D+ + + TPAK+ Sbjct: 388 SSSNEEVVATVAPSPVKSSSPAHLPLSHPPATPLKKTDSTDNQDFCSMKTPDIQVTPAKL 447 Query: 19 VSTPAK 2 +PA+ Sbjct: 448 AFSPAR 453 >ref|NP_001052191.1| Os04g0185100 [Oryza sativa Japonica Group] gi|38344618|emb|CAE02517.2| OSJNBb0003A12.4 [Oryza sativa Japonica Group] gi|38347086|emb|CAD39469.2| OSJNBa0001M07.6 [Oryza sativa Japonica Group] gi|113563762|dbj|BAF14105.1| Os04g0185100 [Oryza sativa Japonica Group] gi|215767412|dbj|BAG99640.1| unnamed protein product [Oryza sativa Japonica Group] Length = 588 Score = 73.2 bits (178), Expect = 3e-11 Identities = 54/185 (29%), Positives = 84/185 (45%) Frame = -3 Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377 K K +GYS L ++FR RL+++ ++ PE +IP ELP PF ++ ++E+ V Sbjct: 231 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 290 Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197 S++T +Q VA SH+ SFK FSQ+S + + A +S Sbjct: 291 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 331 Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17 + SK++ L S + P V E K + + + SE TPAK Sbjct: 332 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 391 Query: 16 STPAK 2 STP + Sbjct: 392 STPVR 396 >gb|EAZ29900.1| hypothetical protein OsJ_13954 [Oryza sativa Japonica Group] Length = 567 Score = 73.2 bits (178), Expect = 3e-11 Identities = 54/185 (29%), Positives = 84/185 (45%) Frame = -3 Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377 K K +GYS L ++FR RL+++ ++ PE +IP ELP PF ++ ++E+ V Sbjct: 210 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 269 Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197 S++T +Q VA SH+ SFK FSQ+S + + A +S Sbjct: 270 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 310 Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17 + SK++ L S + P V E K + + + SE TPAK Sbjct: 311 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 370 Query: 16 STPAK 2 STP + Sbjct: 371 STPVR 375 >gb|EAY93202.1| hypothetical protein OsI_15007 [Oryza sativa Indica Group] Length = 585 Score = 73.2 bits (178), Expect = 3e-11 Identities = 54/185 (29%), Positives = 84/185 (45%) Frame = -3 Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377 K K +GYS L ++FR RL+++ ++ PE +IP ELP PF ++ ++E+ V Sbjct: 228 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 287 Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197 S++T +Q VA SH+ SFK FSQ+S + + A +S Sbjct: 288 SALPLSSATDRQ-PVAMSHMPNSFKRMFSQRS------------------AAAAAATTST 328 Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17 + SK++ L S + P V E K + + + SE TPAK Sbjct: 329 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 388 Query: 16 STPAK 2 STP + Sbjct: 389 STPVR 393 >emb|CAH65885.1| OSIGBa0148J22.4 [Oryza sativa Indica Group] gi|116317863|emb|CAH65893.1| OSIGBa0132G14.1 [Oryza sativa Indica Group] Length = 582 Score = 70.9 bits (172), Expect = 1e-10 Identities = 53/185 (28%), Positives = 83/185 (44%) Frame = -3 Query: 556 KGKIGSGYSNLSKVFRTRLLEFVKNQPEEREIPMGELPEPFNTRMQNSLWTLKENCKSPV 377 K K +GYS L ++FR RL+++ ++ PE +IP ELP PF ++ ++E+ V Sbjct: 225 KQKGETGYSALRRIFRQRLVDYFRDHPEGHDIPEHELPHPFGPTRSSAPQAIQEDIPKTV 284 Query: 376 PVHSSSNSTPQQSTVAASHLSQSFKTRFSQKSSFPESEKTGMLSTTHKHLSHSEEARSSV 197 S++T +Q VA SH+ S K FSQ+S + + A +S Sbjct: 285 SALPLSSATDRQ-PVAMSHMPNSLKRMFSQRS------------------AAAAAATTST 325 Query: 196 ATQSSKLQTIKNISLLEVSYVNLPTQRPVEPDDEETNHIKDKDYLLKEINPSEETPAKVV 17 + SK++ L S + P V E K + + + SE TPAK Sbjct: 326 TSPLSKVEPSITSPLSRKSLLGSPVSGSVSLVRESEGQEKSVEGVAFQSGVSEGTPAKFA 385 Query: 16 STPAK 2 STP + Sbjct: 386 STPVR 390