BLASTX nr result

ID: Coptis24_contig00034096 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034096
         (290 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266236.1| PREDICTED: uncharacterized protein LOC100250...    75   6e-12
ref|XP_002327661.1| predicted protein [Populus trichocarpa] gi|2...    71   1e-10
ref|XP_002300710.1| predicted protein [Populus trichocarpa] gi|2...    68   7e-10
ref|XP_002307716.1| predicted protein [Populus trichocarpa] gi|2...    68   9e-10
ref|XP_003612163.1| hypothetical protein MTR_5g021990 [Medicago ...    67   2e-09

>ref|XP_002266236.1| PREDICTED: uncharacterized protein LOC100250667 [Vitis vinifera]
           gi|147792155|emb|CAN72990.1| hypothetical protein
           VITISV_031851 [Vitis vinifera]
          Length = 204

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 38/46 (82%), Positives = 41/46 (89%)
 Frame = -2

Query: 139 MDREEVVVVTSRAEIDTRAPFQSVKEAVMLFGERVLAGEIYDNKLK 2
           M+R E VVV  RAEIDTRAPF+SVKEAVMLFGERVLAGE+Y NKLK
Sbjct: 1   MERAEGVVVMGRAEIDTRAPFRSVKEAVMLFGERVLAGELYANKLK 46


>ref|XP_002327661.1| predicted protein [Populus trichocarpa] gi|222836746|gb|EEE75139.1|
           predicted protein [Populus trichocarpa]
          Length = 216

 Score = 70.9 bits (172), Expect = 1e-10
 Identities = 37/48 (77%), Positives = 43/48 (89%), Gaps = 2/48 (4%)
 Frame = -2

Query: 139 MDREE--VVVVTSRAEIDTRAPFQSVKEAVMLFGERVLAGEIYDNKLK 2
           M+REE  ++VV  RAEIDTRAPF+SV+EAV+LFGERVLAGEIY NKLK
Sbjct: 1   MNREEGGLLVVNGRAEIDTRAPFKSVREAVVLFGERVLAGEIYANKLK 48


>ref|XP_002300710.1| predicted protein [Populus trichocarpa] gi|222842436|gb|EEE79983.1|
           predicted protein [Populus trichocarpa]
          Length = 206

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 34/42 (80%), Positives = 37/42 (88%)
 Frame = -2

Query: 127 EVVVVTSRAEIDTRAPFQSVKEAVMLFGERVLAGEIYDNKLK 2
           E V+V  RAEIDTRAPF+SVKEAV LFGERVLAGE+Y NKLK
Sbjct: 4   EGVIVLKRAEIDTRAPFRSVKEAVTLFGERVLAGELYANKLK 45


>ref|XP_002307716.1| predicted protein [Populus trichocarpa] gi|222857165|gb|EEE94712.1|
           predicted protein [Populus trichocarpa]
          Length = 201

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 34/46 (73%), Positives = 39/46 (84%)
 Frame = -2

Query: 139 MDREEVVVVTSRAEIDTRAPFQSVKEAVMLFGERVLAGEIYDNKLK 2
           M+ EE V+V  RAEIDTRAPF+SVKEAV LFGE+VLA E+Y NKLK
Sbjct: 1   MEGEEGVIVLKRAEIDTRAPFRSVKEAVTLFGEKVLAEELYANKLK 46


>ref|XP_003612163.1| hypothetical protein MTR_5g021990 [Medicago truncatula]
           gi|355513498|gb|AES95121.1| hypothetical protein
           MTR_5g021990 [Medicago truncatula]
          Length = 215

 Score = 67.0 bits (162), Expect = 2e-09
 Identities = 35/47 (74%), Positives = 39/47 (82%), Gaps = 1/47 (2%)
 Frame = -2

Query: 139 MDREEV-VVVTSRAEIDTRAPFQSVKEAVMLFGERVLAGEIYDNKLK 2
           MDREE   ++  RAEIDT APF+SVKEAV+LFGERVL GEIY NKLK
Sbjct: 1   MDREESGTLIMGRAEIDTGAPFKSVKEAVLLFGERVLVGEIYANKLK 47


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