BLASTX nr result

ID: Coptis24_contig00034081 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034081
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CCH50966.1| T4.5 [Malus x robusta]                                105   3e-21
emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]    85   5e-15
emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]    84   9e-15
emb|CAN63127.1| hypothetical protein VITISV_033593 [Vitis vinifera]    84   9e-15
gb|ACN32036.1| unknown [Zea mays]                                      84   2e-14

>emb|CCH50966.1| T4.5 [Malus x robusta]
          Length = 1670

 Score =  105 bits (263), Expect = 3e-21
 Identities = 57/127 (44%), Positives = 88/127 (69%), Gaps = 1/127 (0%)
 Frame = +1

Query: 7   ARDLWLTLEKRLSTISVAHVMQLKNQLQDLKKGELSMAEYLKNIKIIADTLAASGSPVVD 186
           +R LW +LE+R S  S  HV  L++++Q + KG+ SM ++L +IK I++ LAA+G P+ +
Sbjct: 359 SRSLWQSLERRFSGASRTHVHSLRSKIQTIHKGDSSMTDFLNSIKEISNKLAAAGEPLSE 418

Query: 187 SDLIYHALRGLPEEYKSFTTSIRTKSTNDHVYSEELHGLLLNEEITLIQR-NRGVINSEQ 363
           SDL+ + L GLP+EY+SF  SI T+  N+ V ++ELHGLLL++EI+L +R  R   +S  
Sbjct: 419 SDLVAYILSGLPDEYESFVDSIETR--NESVTADELHGLLLSKEISLQKRKTRASSSSNA 476

Query: 364 IHQAFAA 384
              A+AA
Sbjct: 477 PFHAYAA 483


>emb|CAN66028.1| hypothetical protein VITISV_020472 [Vitis vinifera]
          Length = 823

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 50/126 (39%), Positives = 69/126 (54%)
 Frame = +1

Query: 7   ARDLWLTLEKRLSTISVAHVMQLKNQLQDLKKGELSMAEYLKNIKIIADTLAASGSPVVD 186
           ++ +W TL+ R S+ S +H+  LK QLQ L +   S +EYL+N K +AD LAA+G P+ D
Sbjct: 55  SKQVWTTLQTRFSSQSCSHISHLKRQLQTLTQSTKSCSEYLENAKNLADQLAAAGKPIDD 114

Query: 187 SDLIYHALRGLPEEYKSFTTSIRTKSTNDHVYSEELHGLLLNEEITLIQRNRGVINSEQI 366
            DLI   L GL   Y  F TS    S +     EE    LL  E  L+  N+ V  ++  
Sbjct: 115 QDLISFLLGGLQSSYTPFVTSFNFVSHDTDFTFEEFQAELLGYE-NLLDVNQSVPGTDSN 173

Query: 367 HQAFAA 384
           H AF+A
Sbjct: 174 HFAFSA 179


>emb|CAN78447.1| hypothetical protein VITISV_026810 [Vitis vinifera]
          Length = 1171

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 51/127 (40%), Positives = 68/127 (53%)
 Frame = +1

Query: 4   TARDLWLTLEKRLSTISVAHVMQLKNQLQDLKKGELSMAEYLKNIKIIADTLAASGSPVV 183
           T++ +W  L+ R S+ S + +  LK QLQ L +G  S +EYL++ K +AD LAA+G PV 
Sbjct: 102 TSKQVWTALQTRFSSQSRSRISHLKRQLQTLTQGTKSCSEYLESAKTLADQLAAAGKPVD 161

Query: 184 DSDLIYHALRGLPEEYKSFTTSIRTKSTNDHVYSEELHGLLLNEEITLIQRNRGVINSEQ 363
           D DLI   L GL   Y  F TS    S       E+    LL  E  L+  N  V N++ 
Sbjct: 162 DQDLISFLLGGLQSSYTPFVTSFNFASRETDFTFEDFQAELLGYE-NLLDVNHSVHNTDG 220

Query: 364 IHQAFAA 384
            H AFAA
Sbjct: 221 PHFAFAA 227


>emb|CAN63127.1| hypothetical protein VITISV_033593 [Vitis vinifera]
          Length = 294

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 46/105 (43%), Positives = 62/105 (59%)
 Frame = +1

Query: 4   TARDLWLTLEKRLSTISVAHVMQLKNQLQDLKKGELSMAEYLKNIKIIADTLAASGSPVV 183
           T+ D W TL    +  S  H+ QLK QL+   KG  S++EY++ IK  AD LA  G P+ 
Sbjct: 93  TSLDAWKTLVNTYAKPSYGHIKQLKEQLKQCTKGSKSISEYMQAIKTHADELALLGKPID 152

Query: 184 DSDLIYHALRGLPEEYKSFTTSIRTKSTNDHVYSEELHGLLLNEE 318
           D DLI   L GL +EYKS   +I+ + T+  +Y  ELH  LLN+E
Sbjct: 153 DEDLIDRVLEGLSDEYKSVIDAIKARDTS--IYFAELHEKLLNKE 195


>gb|ACN32036.1| unknown [Zea mays]
          Length = 376

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 48/124 (38%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
 Frame = +1

Query: 4   TARDLWLTLEKRLSTISVAHVMQLKNQLQDLKKGELSMAEYLKNIKIIADTLAASGSPVV 183
           TAR  W TLE+  ++ S A +MQ++ QL  ++KG+L+ AEY + +K +ADTLAA G  + 
Sbjct: 116 TARGAWSTLERMYASSSRARIMQIRMQLATIQKGDLTAAEYFRKVKRLADTLAAVGKRLE 175

Query: 184 DSDLIYHALRGLPEEYKSFTTSIRTKS---TNDHVYSEELHGLLLNEEITLIQRNRGVIN 354
           D + I + LRGLP +Y S  TSI T+    T   VY+  L      E  T + +   V N
Sbjct: 176 DEEFISYLLRGLPADYDSLVTSITTRPDTYTISDVYAHLLSFETRQEYHTAVGQISSVNN 235

Query: 355 SEQI 366
           + ++
Sbjct: 236 ANRV 239


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