BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034078
         (255 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
emb|CBI20738.3| unnamed protein product [Vitis vinifera]               94   2e-17
emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]    94   2e-17
ref|XP_002867196.1| pentatricopeptide repeat-containing protein ...    92   4e-17

>ref|XP_002281998.2| PREDICTED: pentatricopeptide repeat-containing protein At4g33170
            [Vitis vinifera]
          Length = 1580

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -3

Query: 253  VIKNLRVCGDCHNAIKYISRTVEREIVVRDANRFHCFKKGTCSCGDYW 110
            VIKNLRVCGDCHNAIKYIS+  EREIV+RDANRFH F+ G CSCGDYW
Sbjct: 1533 VIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 1580


>ref|XP_003527761.1| PREDICTED: pentatricopeptide repeat-containing protein At4g33170-like
            [Glycine max]
          Length = 1582

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 253  VIKNLRVCGDCHNAIKYISRTVEREIVVRDANRFHCFKKGTCSCGDYW 110
            VIKNLRVCGDCHNAIKYIS+  ERE+V+RDANRFH F+ G CSCGDYW
Sbjct: 1535 VIKNLRVCGDCHNAIKYISKVFEREVVLRDANRFHHFRSGVCSCGDYW 1582


>emb|CBI20738.3| unnamed protein product [Vitis vinifera]
          Length = 865

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -3

Query: 253 VIKNLRVCGDCHNAIKYISRTVEREIVVRDANRFHCFKKGTCSCGDYW 110
           VIKNLRVCGDCHNAIKYIS+  EREIV+RDANRFH F+ G CSCGDYW
Sbjct: 818 VIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 865


>emb|CAN76239.1| hypothetical protein VITISV_016538 [Vitis vinifera]
          Length = 503

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 40/48 (83%), Positives = 43/48 (89%)
 Frame = -3

Query: 253 VIKNLRVCGDCHNAIKYISRTVEREIVVRDANRFHCFKKGTCSCGDYW 110
           VIKNLRVCGDCHNAIKYIS+  EREIV+RDANRFH F+ G CSCGDYW
Sbjct: 456 VIKNLRVCGDCHNAIKYISKVFEREIVLRDANRFHHFRDGVCSCGDYW 503


>ref|XP_002867196.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
            subsp. lyrata] gi|297313032|gb|EFH43455.1|
            pentatricopeptide repeat-containing protein [Arabidopsis
            lyrata subsp. lyrata]
          Length = 997

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 39/48 (81%), Positives = 43/48 (89%)
 Frame = -3

Query: 253  VIKNLRVCGDCHNAIKYISRTVEREIVVRDANRFHCFKKGTCSCGDYW 110
            VIKNLRVCGDCHNA+KYIS+  +REIV+RDANRFH FK G CSCGDYW
Sbjct: 950  VIKNLRVCGDCHNAMKYISKVYDREIVLRDANRFHRFKDGICSCGDYW 997