BLASTX nr result

ID: Coptis24_contig00034025 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034025
         (264 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621884.1| hypothetical protein MTR_7g024560 [Medicago ...   124   1e-26
ref|XP_003552694.1| PREDICTED: uncharacterized protein LOC100788...   117   8e-25
ref|XP_002532296.1| conserved hypothetical protein [Ricinus comm...   116   2e-24
ref|XP_002278627.2| PREDICTED: uncharacterized protein LOC100263...   116   2e-24
ref|XP_002332584.1| predicted protein [Populus trichocarpa] gi|2...   110   9e-23

>ref|XP_003621884.1| hypothetical protein MTR_7g024560 [Medicago truncatula]
           gi|355496899|gb|AES78102.1| hypothetical protein
           MTR_7g024560 [Medicago truncatula]
          Length = 307

 Score =  124 bits (310), Expect = 1e-26
 Identities = 56/70 (80%), Positives = 63/70 (90%)
 Frame = +2

Query: 53  SKPIVLTYAQKCKNILVSNWQGQLHTIKADAKGSKEDIHSSKVKYFLKRGKPYVWVPEND 232
           SK  VLT+A+KCKNIL SNWQG L+TIKADAKGSK DIH+SKVKY L+RG+PY+WVPEND
Sbjct: 4   SKTTVLTFAEKCKNILTSNWQGSLNTIKADAKGSKGDIHTSKVKYILRRGQPYLWVPEND 63

Query: 233 FHNMNTIIDE 262
            HNMNTIIDE
Sbjct: 64  LHNMNTIIDE 73


>ref|XP_003552694.1| PREDICTED: uncharacterized protein LOC100788957 [Glycine max]
          Length = 308

 Score =  117 bits (294), Expect = 8e-25
 Identities = 51/70 (72%), Positives = 63/70 (90%)
 Frame = +2

Query: 53  SKPIVLTYAQKCKNILVSNWQGQLHTIKADAKGSKEDIHSSKVKYFLKRGKPYVWVPEND 232
           +K  VLT+A+KCKNIL SNWQG L+TIKADAKGSK +IH+SK+KY ++RG+PY+WVPEND
Sbjct: 4   NKATVLTFAEKCKNILASNWQGSLNTIKADAKGSKGNIHTSKIKYIVRRGQPYLWVPEND 63

Query: 233 FHNMNTIIDE 262
            HN+NTIIDE
Sbjct: 64  LHNVNTIIDE 73


>ref|XP_002532296.1| conserved hypothetical protein [Ricinus communis]
           gi|223527998|gb|EEF30080.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 294

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/70 (72%), Positives = 61/70 (87%)
 Frame = +2

Query: 53  SKPIVLTYAQKCKNILVSNWQGQLHTIKADAKGSKEDIHSSKVKYFLKRGKPYVWVPEND 232
           SK  VLT AQ+CKNIL SNWQ  L+TIKADAKGSKEDI++SKVKY +K+G+PY+WVPE D
Sbjct: 4   SKATVLTLAQRCKNILASNWQAHLNTIKADAKGSKEDIYTSKVKYIVKKGRPYIWVPEKD 63

Query: 233 FHNMNTIIDE 262
            HN+NT+IDE
Sbjct: 64  MHNVNTVIDE 73


>ref|XP_002278627.2| PREDICTED: uncharacterized protein LOC100263308 [Vitis vinifera]
           gi|296086229|emb|CBI31670.3| unnamed protein product
           [Vitis vinifera]
          Length = 309

 Score =  116 bits (290), Expect = 2e-24
 Identities = 51/70 (72%), Positives = 62/70 (88%)
 Frame = +2

Query: 53  SKPIVLTYAQKCKNILVSNWQGQLHTIKADAKGSKEDIHSSKVKYFLKRGKPYVWVPEND 232
           +K  +LT A++CKNIL SNWQG+L+TIKADAKGSK DI+SSKV Y +KRGKPY+WVP+ND
Sbjct: 4   NKASILTAAERCKNILASNWQGRLNTIKADAKGSKADIYSSKVNYMVKRGKPYIWVPDND 63

Query: 233 FHNMNTIIDE 262
            HN+NTIIDE
Sbjct: 64  LHNVNTIIDE 73


>ref|XP_002332584.1| predicted protein [Populus trichocarpa] gi|222832922|gb|EEE71399.1|
           predicted protein [Populus trichocarpa]
          Length = 132

 Score =  110 bits (276), Expect = 9e-23
 Identities = 51/70 (72%), Positives = 59/70 (84%)
 Frame = +2

Query: 53  SKPIVLTYAQKCKNILVSNWQGQLHTIKADAKGSKEDIHSSKVKYFLKRGKPYVWVPEND 232
           SK  +LT A+KCKNIL SNWQ QL+TIKADAKGSK  I+SSKVKY LK+GKPY+WV E D
Sbjct: 4   SKTTILTLAEKCKNILASNWQAQLNTIKADAKGSKGGIYSSKVKYILKKGKPYLWVNEKD 63

Query: 233 FHNMNTIIDE 262
            HN+NTIID+
Sbjct: 64  MHNVNTIIDD 73


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