BLASTX nr result

ID: Coptis24_contig00034023 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034023
         (611 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus c...   194   8e-48
ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|2...   191   7e-47
ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|2...   176   4e-42
ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266...   166   4e-39
ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224...   156   2e-36

>ref|XP_002520967.1| hypothetical protein RCOM_0991200 [Ricinus communis]
            gi|223539804|gb|EEF41384.1| hypothetical protein
            RCOM_0991200 [Ricinus communis]
          Length = 773

 Score =  194 bits (494), Expect = 8e-48
 Identities = 106/192 (55%), Positives = 136/192 (70%), Gaps = 7/192 (3%)
 Frame = +3

Query: 6    IKRCNNFNDQSVELEEDNWSPVISPVRLKS----DDSDLVYVSEILKAXXXXXXXXXXXX 173
            +KR  +F DQ  ELE+D WSP ISP++LKS    DD D VY+S+IL+A            
Sbjct: 570  MKRSVDFKDQLAELEDDIWSPAISPIQLKSVENSDDCDFVYISDILRASNFLPEDSDVFL 629

Query: 174  X-ERQCYKT--NSSYLSKVHRKLIFDTITEILDRKKQLPPWKAVSCINPTTTGKLSFRQI 344
              E+Q Y    ++S +S++ RKLIFDTI EIL+RK+QLPPWKA  CI+ ++  +   +QI
Sbjct: 630  LLEKQQYLKGKDTSKVSRLQRKLIFDTIHEILNRKRQLPPWKASICIS-SSGEQTPLQQI 688

Query: 345  WSEFSRIREPSLAEDLSEVICGVLKKDLADETINGWEDCAIETSEVVLDIERSIFKDLIS 524
            WSEF RIRE   ++DL EVICG+LKKDLA ++INGW DC IE SE VLDIER IFKDLI 
Sbjct: 689  WSEFQRIRERDASDDLLEVICGMLKKDLAGDSINGWGDCPIEMSETVLDIERLIFKDLIG 748

Query: 525  DTIRDLASYAGK 560
            +TI+DLA++ GK
Sbjct: 749  ETIQDLAAFTGK 760


>ref|XP_002302082.1| predicted protein [Populus trichocarpa] gi|222843808|gb|EEE81355.1|
            predicted protein [Populus trichocarpa]
          Length = 789

 Score =  191 bits (486), Expect = 7e-47
 Identities = 103/192 (53%), Positives = 133/192 (69%), Gaps = 5/192 (2%)
 Frame = +3

Query: 6    IKRCNNFNDQ--SVELEEDNWSPVISPVRLKSDDSDLVYVSEILKAXXXXXXXXXXXXX- 176
            +KR  +F DQ   VE+E+D WS  IS     SDDSDL+Y+S+IL+A              
Sbjct: 585  MKRTVDFKDQLEEVEVEDDIWSTTISTAESNSDDSDLMYISDILRASNYLPEDSDIFLLL 644

Query: 177  ERQCYKT--NSSYLSKVHRKLIFDTITEILDRKKQLPPWKAVSCINPTTTGKLSFRQIWS 350
            E+Q Y    ++S +S + RKL+FDTITEIL+ ++ LPPWKA+S  NP + G +S +QIWS
Sbjct: 645  EKQQYLKGKDTSKVSTLQRKLVFDTITEILNSRRHLPPWKAISLTNPES-GPISLQQIWS 703

Query: 351  EFSRIREPSLAEDLSEVICGVLKKDLADETINGWEDCAIETSEVVLDIERSIFKDLISDT 530
            EF RIRE   ++DL EVICGVL+KDLA +TINGW DC IE SE VLDIER +FKDLI +T
Sbjct: 704  EFQRIRERDASDDLFEVICGVLRKDLAGDTINGWGDCPIEMSEAVLDIERLVFKDLIGET 763

Query: 531  IRDLASYAGKSR 566
            IRDLA++  K +
Sbjct: 764  IRDLAAFGRKGK 775


>ref|XP_002306805.1| predicted protein [Populus trichocarpa] gi|222856254|gb|EEE93801.1|
           predicted protein [Populus trichocarpa]
          Length = 604

 Score =  176 bits (445), Expect = 4e-42
 Identities = 98/202 (48%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
 Frame = +3

Query: 6   IKRCNNFNDQSVELEEDNWSPVISPVRLKSDDSDLVYVSEILKAXXXXXXXXXXXXX--- 176
           +KRC +F     ELE+D WS  IS     SDD D +Y+S+IL+A                
Sbjct: 416 MKRCVDFK----ELEDDMWSTAISHAESNSDDWDFMYISDILRASNYLPEDSDIFQFLER 471

Query: 177 ERQCYKTNSSYLSKVHRKLIFDTITEILDRKKQLPPWKAVSCINPTTTGKLSFRQIWSEF 356
           +R     ++S +  + RKL+FDTITEIL+RK+ LPPWK          G++S +Q+WSEF
Sbjct: 472 QRHLKGKDTSQVPALQRKLVFDTITEILNRKRHLPPWKG---------GQISLQQVWSEF 522

Query: 357 SRIREPSLAEDLSEVICGVLKKDLADETINGWEDCAIETSEVVLDIERSIFKDLISDTIR 536
            RIRE   ++DL EVICG+L+KDLA +TI GW DC IE SE VLDIER IFKDLI +TIR
Sbjct: 523 QRIRERDASDDLVEVICGMLRKDLAGDTITGWGDCPIEMSEAVLDIERLIFKDLIGETIR 582

Query: 537 DLASYAGKSRGFEP---KKLLF 593
           DLA++  K     P   +KLLF
Sbjct: 583 DLAAFCRKGNQVVPVPRRKLLF 604


>ref|XP_002274907.2| PREDICTED: uncharacterized protein LOC100266517 [Vitis vinifera]
          Length = 800

 Score =  166 bits (419), Expect = 4e-39
 Identities = 92/182 (50%), Positives = 124/182 (68%), Gaps = 7/182 (3%)
 Frame = +3

Query: 42   ELEEDNWSPVISPVRLK----SDDSDLVYVSEILKAXXXXXXXXXXXXX--ERQCYK-TN 200
            ELE++  SP  S V LK     +D D +YVSEIL+A               E+Q  K  +
Sbjct: 608  ELEDEVGSPEASAVELKFEEKPEDCDFIYVSEILQASNYHPEDSDVFLLLEEQQSLKGKD 667

Query: 201  SSYLSKVHRKLIFDTITEILDRKKQLPPWKAVSCINPTTTGKLSFRQIWSEFSRIREPSL 380
            +S +S++ R+LIFDTITEI+++K +LPPWKA+S  N   +GK S +QIW+EF RIRE   
Sbjct: 668  TSKVSRLQRRLIFDTITEIINQKSKLPPWKAISISN---SGKSSLQQIWAEFIRIREREA 724

Query: 381  AEDLSEVICGVLKKDLADETINGWEDCAIETSEVVLDIERSIFKDLISDTIRDLASYAGK 560
            +EDL ++ICGVL+KDLA + I GW DC +E SE VL IER IF+DL+ +TIRDLA+++GK
Sbjct: 725  SEDLFDIICGVLRKDLAGDAITGWGDCHVEMSEAVLYIERLIFRDLVGETIRDLAAFSGK 784

Query: 561  SR 566
             R
Sbjct: 785  VR 786


>ref|XP_004163564.1| PREDICTED: uncharacterized protein LOC101224478 [Cucumis sativus]
          Length = 771

 Score =  156 bits (395), Expect = 2e-36
 Identities = 93/196 (47%), Positives = 122/196 (62%), Gaps = 11/196 (5%)
 Frame = +3

Query: 6    IKRCNNFNDQSVELEEDNWSPVISPVRLK----SDDSDLVYVSEILKAXXXXXXXXXXXX 173
            +KR  +F DQ V++E++ W   IS + L     SDD D +YV ++L+A            
Sbjct: 561  LKRQIDFKDQVVDVEDEGWFQAISSMELGLADGSDDGDFIYVMDVLRASRCLQDDDSDIF 620

Query: 174  X---ERQCYKTNS-SYLSKVHRKLIFDTITEILDRKKQLPPWKAVSCINPTT-TGKLSFR 338
                E+Q  K    S + ++ R+LIFDTITEILDR +QLPPWK  S + P + T   S +
Sbjct: 621  LLLEEQQYLKGKDVSKVPRLQRRLIFDTITEILDRNRQLPPWK--SNVQPESMTEPTSMQ 678

Query: 339  QIWSEFSRIR--EPSLAEDLSEVICGVLKKDLADETINGWEDCAIETSEVVLDIERSIFK 512
            +IWSEF R+R  E   +EDL EVIC VLKKDL  +  +GW D  +ETS+ VLDIER IFK
Sbjct: 679  EIWSEFQRMRDRENDTSEDLFEVICSVLKKDLTRDAPSGWRDWPVETSQAVLDIERLIFK 738

Query: 513  DLISDTIRDLASYAGK 560
            DLI +TIRDLA+  GK
Sbjct: 739  DLIGETIRDLATITGK 754


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