BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034020
         (261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]    58   7e-07
gb|AAF23839.1|AC007234_11 F1E22.11 [Arabidopsis thaliana]              55   5e-06
ref|NP_176751.1| uncharacterized protein [Arabidopsis thaliana] ...    55   5e-06
ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protei...    55   6e-06

>emb|CAN67605.1| hypothetical protein VITISV_030993 [Vitis vinifera]
          Length = 1290

 Score = 58.2 bits (139), Expect = 7e-07
 Identities = 31/69 (44%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
 Frame = +2

Query: 56   FRVFKFHLCTEKWEEVYSLGDYAFFVGSSTSFSLLASDYRGCKPSSIYFTDRLLCNMH-S 232
            F V K  +C ++WEEV +L   +FF+G++ SFS  ASDY   + +SIYFTD     ++  
Sbjct: 1192 FSVLKLDMCNKRWEEVENLDHCSFFLGNNHSFSTWASDYPEFRKNSIYFTDDYCGFLNIP 1251

Query: 233  WGFCMGIYN 259
              F MGIYN
Sbjct: 1252 RNFDMGIYN 1260


>gb|AAF23839.1|AC007234_11 F1E22.11 [Arabidopsis thaliana]
          Length = 526

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = +2

Query: 56  FRVFKFHLCTEKWEEVYSLGDYAFFVGSSTSFSLLASDYRGCKPSSIYFTDRL 214
           F+V+K      KW EV +LGD AF + + T FS+LA +Y GC P+SIYF + L
Sbjct: 285 FKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYFIEDL 337


>ref|NP_176751.1| uncharacterized protein [Arabidopsis thaliana]
           gi|378405164|sp|Q9SHY1.2|FB317_ARATH RecName:
           Full=Probable F-box protein At1g65740
           gi|332196298|gb|AEE34419.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 371

 Score = 55.5 bits (132), Expect = 5e-06
 Identities = 26/53 (49%), Positives = 35/53 (66%)
 Frame = +2

Query: 56  FRVFKFHLCTEKWEEVYSLGDYAFFVGSSTSFSLLASDYRGCKPSSIYFTDRL 214
           F+V+K      KW EV +LGD AF + + T FS+LA +Y GC P+SIYF + L
Sbjct: 285 FKVYKIDKELAKWVEVKTLGDNAFVMATDTCFSVLAHEYYGCLPNSIYFIEDL 337


>ref|XP_002279526.2| PREDICTED: LOW QUALITY PROTEIN: F-box protein SKIP23-like [Vitis
           vinifera]
          Length = 387

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/52 (48%), Positives = 35/52 (67%)
 Frame = +2

Query: 53  YFRVFKFHLCTEKWEEVYSLGDYAFFVGSSTSFSLLASDYRGCKPSSIYFTD 208
           +F+VF+     +KW E+ SLGD   F+G  +SFS  ASD+ GCK +SI FT+
Sbjct: 281 HFKVFRLDQREQKWVEIESLGDRLLFLGDDSSFSARASDFYGCKGNSICFTN 332