BLASTX nr result

ID: Coptis24_contig00034016 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00034016
         (374 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...    92   3e-17
emb|CBI21909.3| unnamed protein product [Vitis vinifera]               89   4e-16
ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837...    86   2e-15
ref|XP_002509419.1| glutaredoxin, grx, putative [Ricinus communi...    84   2e-14
ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinif...    82   5e-14

>ref|XP_002262673.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 141

 Score = 92.4 bits (228), Expect = 3e-17
 Identities = 48/105 (45%), Positives = 70/105 (66%), Gaps = 3/105 (2%)
 Frame = +1

Query: 58  MQQAIPFKKWTPGSKESVVNQSSSIVKKEEEALNNEGVLKRPKD---MVSENAVLVLGRR 228
           MQ+A+P+K W P  +E  +N  ++        L+N+ +L    +   MVSENAV+V GRR
Sbjct: 1   MQEALPYKTWLPIPREPRINTPTT-------PLHNQLLLPGTTNITNMVSENAVIVFGRR 53

Query: 229 GCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREK 363
           GCCM HV+K+LLL  GVNP +CEV++ +EI V++ELG +G+   K
Sbjct: 54  GCCMTHVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMVGAGEGK 98


>emb|CBI21909.3| unnamed protein product [Vitis vinifera]
          Length = 113

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 47/100 (47%), Positives = 67/100 (67%), Gaps = 3/100 (3%)
 Frame = +1

Query: 58  MQQAIPFKKWTPGSKESVVNQSSSIVKKEEEALNNEGVLKRPKD---MVSENAVLVLGRR 228
           MQ+A+P+K W P  +E  +N  ++        L+N+ +L    +   MVSENAV+V GRR
Sbjct: 1   MQEALPYKTWLPIPREPRINTPTT-------PLHNQLLLPGTTNITNMVSENAVIVFGRR 53

Query: 229 GCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIG 348
           GCCM HV+K+LLL  GVNP +CEV++ +EI V++ELG  G
Sbjct: 54  GCCMTHVVKRLLLGLGVNPAVCEVNEEDEIGVLDELGMEG 93


>ref|XP_002327897.1| glutaredoxin [Populus trichocarpa] gi|222837306|gb|EEE75685.1|
           glutaredoxin [Populus trichocarpa]
          Length = 155

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 46/108 (42%), Positives = 63/108 (58%), Gaps = 9/108 (8%)
 Frame = +1

Query: 58  MQQAIPFKKWTP---------GSKESVVNQSSSIVKKEEEALNNEGVLKRPKDMVSENAV 210
           MQQAIP+K W P            + + + S+  V   +E L      +   +MV ENA+
Sbjct: 1   MQQAIPYKSWLPLYTNNKPLISPSQLISHHSNGGVVAAQEVLKGS---RNISEMVQENAI 57

Query: 211 LVLGRRGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSD 354
           +V  RRGCCM HV K+LLL  GVNP + E+D+A+EI V+ EL  IG+D
Sbjct: 58  IVFARRGCCMSHVAKRLLLGLGVNPAVYEIDEADEISVLEELEMIGND 105


>ref|XP_002509419.1| glutaredoxin, grx, putative [Ricinus communis]
           gi|223549318|gb|EEF50806.1| glutaredoxin, grx, putative
           [Ricinus communis]
          Length = 146

 Score = 83.6 bits (205), Expect = 2e-14
 Identities = 45/106 (42%), Positives = 65/106 (61%), Gaps = 2/106 (1%)
 Frame = +1

Query: 58  MQQAIPFKKWTPGSKESVVNQS--SSIVKKEEEALNNEGVLKRPKDMVSENAVLVLGRRG 231
           MQ+AIPF+ + P +  S  N+   S          N E  +++   +V EN+V+V G+RG
Sbjct: 1   MQEAIPFRTYIPATATSGSNRQLPSRDGGNVLVLANGENYVQK---LVLENSVIVFGKRG 57

Query: 232 CCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTIGSDREKND 369
           CCMCHV+K+LLL  GVNP + EVD+ EE  +++EL  I  D E+ D
Sbjct: 58  CCMCHVVKRLLLGLGVNPAVFEVDEKEETAIIDELSIIDGDTERED 103


>ref|XP_002278515.1| PREDICTED: glutaredoxin-C9-like [Vitis vinifera]
          Length = 150

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 44/100 (44%), Positives = 59/100 (59%), Gaps = 4/100 (4%)
 Frame = +1

Query: 58  MQQAIPFKKWTPGSKESVVNQSSSIVKKEEEALNNEGVLKRP----KDMVSENAVLVLGR 225
           M QA+P++ W P +        SS   +  +   N GV  +       MVSENAV+V GR
Sbjct: 1   MHQALPYRTWVPTTGGGSSAGPSSATIEPSDGPMNPGVGMKDVTCVTKMVSENAVIVFGR 60

Query: 226 RGCCMCHVMKQLLLVHGVNPVICEVDQAEEIDVVNELGTI 345
           RGCCMCHV+ +LLL  GVNP + EVD+ +E  VV+EL  +
Sbjct: 61  RGCCMCHVVMRLLLGLGVNPTVFEVDEEDEAAVVDELSRV 100


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