BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033901
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medic...   252   4e-65
ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medic...   252   4e-65
ref|XP_002511689.1| DNA repair and recombination protein radA, p...   251   6e-65
ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog ...   246   2e-63
dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombinat...   243   1e-62

>ref|XP_003605159.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|355506214|gb|AES87356.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  252 bits (643), Expect = 4e-65
 Identities = 131/195 (67%), Positives = 154/195 (78%), Gaps = 9/195 (4%)
 Frame = +2

Query: 32  HLARDLNVSHDEAVEILKIASHSHRFDPLIITNNSKTNA-IVTGAQTAWEMLSEEEYSTR 208
           HLARD+ VS  EA+EIL  A+ S   D      +S +NA ++ G QTAW+ML+EE +S+ 
Sbjct: 34  HLARDIEVSESEALEILNFATRSSDLD-----KSSGSNANVIHGGQTAWDMLNEERFSSL 88

Query: 209 ITTSCEDLDNILGGGISCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVD 388
           ITTSC DLDNILGGGI+CKEVTEIGGVPGIGKTQ+GIQLAVNVQIP+D GGLGGKAIY+D
Sbjct: 89  ITTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYID 148

Query: 389 TEGSFMVERVFQIAEACIEDLLE--GHACKD------QMQPKTFLSNIFYFRICSYTEQI 544
           TEGSFMVERV QIAEACIEDL E   H  KD      +M P + L NIFYFR+CSYTEQI
Sbjct: 149 TEGSFMVERVLQIAEACIEDLSEYSHHFYKDNQAFGVKMHPNSILENIFYFRVCSYTEQI 208

Query: 545 ALINYLEKFIAENRD 589
           AL+NYL+KF+ E++D
Sbjct: 209 ALVNYLDKFVTEHKD 223


>ref|XP_003609084.1| DNA repair protein RAD51-like protein [Medicago truncatula]
           gi|357477663|ref|XP_003609117.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510139|gb|AES91281.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
           gi|355510172|gb|AES91314.1| DNA repair protein
           RAD51-like protein [Medicago truncatula]
          Length = 347

 Score =  252 bits (643), Expect = 4e-65
 Identities = 129/194 (66%), Positives = 154/194 (79%), Gaps = 8/194 (4%)
 Frame = +2

Query: 32  HLARDLNVSHDEAVEILKIASHSHRFDPLIITNNSKTNAIVTGAQTAWEMLSEEEYSTRI 211
           HL RD+ VS  EA+EIL  A+ S+  D    ++ S TN ++ G QTAW+ML+EE +S+ I
Sbjct: 34  HLVRDIEVSESEALEILNFATRSNDLDK---SSGSNTN-VIDGGQTAWDMLNEERFSSLI 89

Query: 212 TTSCEDLDNILGGGISCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDT 391
           TTSC DLDNILGGGI+CKEVTEIGGVPGIGKTQ+GIQLAVNVQIP+D GGLGGKAIY+DT
Sbjct: 90  TTSCLDLDNILGGGINCKEVTEIGGVPGIGKTQIGIQLAVNVQIPLDYGGLGGKAIYIDT 149

Query: 392 EGSFMVERVFQIAEACIEDLLE--GHACKD------QMQPKTFLSNIFYFRICSYTEQIA 547
           EGSFMVERV QIAEACIED+ E   H  KD      +M P + L NIFYFR+CSYTEQIA
Sbjct: 150 EGSFMVERVLQIAEACIEDMSEYSHHFHKDNQAFGVKMHPNSILENIFYFRVCSYTEQIA 209

Query: 548 LINYLEKFIAENRD 589
           L+NYL+KF+ E++D
Sbjct: 210 LVNYLDKFVTEHKD 223


>ref|XP_002511689.1| DNA repair and recombination protein radA, putative [Ricinus
           communis] gi|223548869|gb|EEF50358.1| DNA repair and
           recombination protein radA, putative [Ricinus communis]
          Length = 346

 Score =  251 bits (641), Expect = 6e-65
 Identities = 127/193 (65%), Positives = 149/193 (77%), Gaps = 8/193 (4%)
 Frame = +2

Query: 35  LARDLNVSHDEAVEILKIASHSHRFDPLIITNNSKTNAIVTGAQTAWEMLSEEEYSTRIT 214
           LARDL +S  EA+EILK+AS + R D +        +A++ GAQ AWEML EE   TRIT
Sbjct: 35  LARDLKISDSEALEILKVASRNSRLDGM-----EGCHAVINGAQNAWEMLHEESSLTRIT 89

Query: 215 TSCEDLDNILGGGISCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTE 394
           TSC DLDNILGGGI+CKEVTEIGG+PGIGKTQLGIQLAVNVQIP  CGGLGGKA+Y+DTE
Sbjct: 90  TSCADLDNILGGGITCKEVTEIGGLPGIGKTQLGIQLAVNVQIPPYCGGLGGKAVYIDTE 149

Query: 395 GSFMVERVFQIAEACIEDLLEG--------HACKDQMQPKTFLSNIFYFRICSYTEQIAL 550
           GSFMVERV Q+AEA +ED+LE           C+   Q K  L NI+YFR+CSYTEQ+AL
Sbjct: 150 GSFMVERVLQVAEASVEDMLEYSRFLRRDLQTCQVATQSKDILENIYYFRVCSYTEQVAL 209

Query: 551 INYLEKFIAENRD 589
           +NYLEKFI+E+RD
Sbjct: 210 VNYLEKFISEHRD 222


>ref|XP_002280748.1| PREDICTED: DNA repair protein RAD51 homolog 3 [Vitis vinifera]
           gi|296089196|emb|CBI38899.3| unnamed protein product
           [Vitis vinifera]
          Length = 346

 Score =  246 bits (629), Expect = 2e-63
 Identities = 127/193 (65%), Positives = 151/193 (78%), Gaps = 8/193 (4%)
 Frame = +2

Query: 35  LARDLNVSHDEAVEILKIASHSHRFDPLIITNNSKTNAIVTGAQTAWEMLSEEEYSTRIT 214
           LA+DL +S +EA+EIL++ S   R D         ++AIV GAQTAW+ML EEE    IT
Sbjct: 35  LAQDLKISDNEALEILRVVSQGSRLD-----KPDGSHAIVNGAQTAWDMLHEEESLKCIT 89

Query: 215 TSCEDLDNILGGGISCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTE 394
           TSC DLD+ILGGGI CKEVTEIGGVPGIGKTQLGIQLAVNVQIPV+ GGLGGKAIY+DTE
Sbjct: 90  TSCVDLDDILGGGIKCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVNYGGLGGKAIYIDTE 149

Query: 395 GSFMVERVFQIAEACIEDL--------LEGHACKDQMQPKTFLSNIFYFRICSYTEQIAL 550
           GSFM+ER  QIAEACIED+         +  +C+ + QPK FL NIFYFR+CSYTEQIA+
Sbjct: 150 GSFMLERSLQIAEACIEDMSGNSDFLQKDFQSCQVKAQPKDFLQNIFYFRVCSYTEQIAM 209

Query: 551 INYLEKFIAENRD 589
           INYL+KFI+E++D
Sbjct: 210 INYLDKFISEHKD 222


>dbj|BAC42893.1| putative f4l23 RAD51Calpha DNA repair-recombination factor
           [Arabidopsis thaliana]
          Length = 342

 Score =  243 bits (621), Expect = 1e-62
 Identities = 125/193 (64%), Positives = 152/193 (78%), Gaps = 8/193 (4%)
 Frame = +2

Query: 35  LARDLNVSHDEAVEILKIASHSHRFDPLIITNNSKTNAIVTGAQTAWEMLSEEEYSTRIT 214
           LARD N++ +EA EILK+A+ S         N S++  ++ GA+ AW+ML EEE   RIT
Sbjct: 35  LARDANITEEEAFEILKLANQS-------CCNGSRS--LINGAKNAWDMLHEEESLPRIT 85

Query: 215 TSCEDLDNILGGGISCKEVTEIGGVPGIGKTQLGIQLAVNVQIPVDCGGLGGKAIYVDTE 394
           TSC DLDNILGGGISC++VTEIGGVPGIGKTQ+GIQL+VNVQIP +CGGLGGKAIY+DTE
Sbjct: 86  TSCSDLDNILGGGISCRDVTEIGGVPGIGKTQIGIQLSVNVQIPRECGGLGGKAIYIDTE 145

Query: 395 GSFMVERVFQIAEACIEDLLE--GHACKD------QMQPKTFLSNIFYFRICSYTEQIAL 550
           GSFMVER  QIAEAC+ED+ E  G+  K       QM+P+  L NIFYFR+CSYTEQIAL
Sbjct: 146 GSFMVERALQIAEACVEDMEEYTGYMHKHFQANQVQMKPEDILENIFYFRVCSYTEQIAL 205

Query: 551 INYLEKFIAENRD 589
           +N+LEKFI+EN+D
Sbjct: 206 VNHLEKFISENKD 218