BLASTX nr result

ID: Coptis24_contig00033861 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033861
         (658 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003631733.1| PREDICTED: scarecrow-like protein 23-like [V...   199   5e-71
ref|XP_002323179.1| GRAS family transcription factor [Populus tr...   200   2e-70
gb|ADL36816.1| SCL domain class transcription factor [Malus x do...   201   4e-69
ref|XP_002308822.1| GRAS family transcription factor [Populus tr...   198   5e-69
gb|AFH54530.1| GRAS family protein, partial [Dimocarpus longan] ...   200   5e-69

>ref|XP_003631733.1| PREDICTED: scarecrow-like protein 23-like [Vitis vinifera]
          Length = 442

 Score =  199 bits (505), Expect(2) = 5e-71
 Identities = 96/111 (86%), Positives = 102/111 (91%)
 Frame = -3

Query: 467 ALFDALGDGQEWDSMERYQVEQHIFGSEIKNIVAVGGPKRTGEVKVERWGEELRRIGFNP 288
           ALFDALGDG   DS+ER+ VEQ + GSEI+NIVAVGGPKRTGEVKV+RWG+EL RIGF P
Sbjct: 332 ALFDALGDGLGVDSLERHTVEQQLLGSEIRNIVAVGGPKRTGEVKVDRWGDELSRIGFRP 391

Query: 287 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 135
           VSLGGNPAAQASLLLGMFPWKGYTLVEENG LKLGWKDLSLLTASAWQPSD
Sbjct: 392 VSLGGNPAAQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD 442



 Score = 95.1 bits (235), Expect(2) = 5e-71
 Identities = 45/61 (73%), Positives = 48/61 (78%)
 Frame = -2

Query: 651 RPNEATVVHWMHHCLYDITGSDLGTXXXXXXXXXXXXXIVEQDLSNGGNFLGRFVEALHY 472
           RP+EATVVHWMHHCLYDITGSDLGT             IVEQDLS+GG+FLGRFVEALHY
Sbjct: 270 RPSEATVVHWMHHCLYDITGSDLGTLRLLTLLRPKLITIVEQDLSHGGSFLGRFVEALHY 329

Query: 471 Y 469
           Y
Sbjct: 330 Y 330


>ref|XP_002323179.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222867809|gb|EEF04940.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 413

 Score =  200 bits (509), Expect(2) = 2e-70
 Identities = 96/111 (86%), Positives = 103/111 (92%)
 Frame = -3

Query: 467 ALFDALGDGQEWDSMERYQVEQHIFGSEIKNIVAVGGPKRTGEVKVERWGEELRRIGFNP 288
           ALFDALGDG   DS+ER+ VEQ +FG EI+NIVAVGGPKRTGEVKVERWG+ELRR+GF P
Sbjct: 303 ALFDALGDGLGVDSVERHMVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRVGFEP 362

Query: 287 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 135
           VSLGG+PAAQASLLLGMFPWKGYTLVEENG LKLGWKDLSLLTASAWQPSD
Sbjct: 363 VSLGGSPAAQASLLLGMFPWKGYTLVEENGSLKLGWKDLSLLTASAWQPSD 413



 Score = 92.0 bits (227), Expect(2) = 2e-70
 Identities = 42/61 (68%), Positives = 45/61 (73%)
 Frame = -2

Query: 651 RPNEATVVHWMHHCLYDITGSDLGTXXXXXXXXXXXXXIVEQDLSNGGNFLGRFVEALHY 472
           RP EA VVHWMHHCLYD+TGSDLGT              VEQDLS+GG+FLGRFVEALHY
Sbjct: 241 RPREAIVVHWMHHCLYDVTGSDLGTLKLLTLLRPKLITTVEQDLSHGGSFLGRFVEALHY 300

Query: 471 Y 469
           Y
Sbjct: 301 Y 301


>gb|ADL36816.1| SCL domain class transcription factor [Malus x domestica]
          Length = 449

 Score =  201 bits (512), Expect(2) = 4e-69
 Identities = 95/111 (85%), Positives = 103/111 (92%)
 Frame = -3

Query: 467 ALFDALGDGQEWDSMERYQVEQHIFGSEIKNIVAVGGPKRTGEVKVERWGEELRRIGFNP 288
           ALFDALGDG   DS+ER+ VEQ +FG EI+NI+AVGGPKRTGEVKVERWG+EL+R+GF P
Sbjct: 339 ALFDALGDGLGADSLERHMVEQQLFGYEIRNILAVGGPKRTGEVKVERWGDELKRVGFGP 398

Query: 287 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 135
           VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQP D
Sbjct: 399 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPLD 449



 Score = 86.3 bits (212), Expect(2) = 4e-69
 Identities = 40/61 (65%), Positives = 44/61 (72%)
 Frame = -2

Query: 651 RPNEATVVHWMHHCLYDITGSDLGTXXXXXXXXXXXXXIVEQDLSNGGNFLGRFVEALHY 472
           RP+EATVVHWMHHCLYD+TGSDL T             I EQDLS+ G+FL RFVEALHY
Sbjct: 277 RPSEATVVHWMHHCLYDVTGSDLATLRLLGSLRPKLITIAEQDLSHSGSFLSRFVEALHY 336

Query: 471 Y 469
           Y
Sbjct: 337 Y 337


>ref|XP_002308822.1| GRAS family transcription factor [Populus trichocarpa]
           gi|222854798|gb|EEE92345.1| GRAS family transcription
           factor [Populus trichocarpa]
          Length = 444

 Score =  198 bits (504), Expect(2) = 5e-69
 Identities = 95/111 (85%), Positives = 101/111 (90%)
 Frame = -3

Query: 467 ALFDALGDGQEWDSMERYQVEQHIFGSEIKNIVAVGGPKRTGEVKVERWGEELRRIGFNP 288
           ALFDALGDG   DS+ER+ VEQ +FG EI+NIVAVGGPKRTGEVKVERWG+ELRR GF P
Sbjct: 334 ALFDALGDGLGVDSVERHMVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGDELRRSGFRP 393

Query: 287 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 135
           VSL GNPAAQA LLLGMFPW+GYTLVEENGCLKLGWKDLSLLTASAWQPSD
Sbjct: 394 VSLQGNPAAQAGLLLGMFPWRGYTLVEENGCLKLGWKDLSLLTASAWQPSD 444



 Score = 89.0 bits (219), Expect(2) = 5e-69
 Identities = 41/61 (67%), Positives = 44/61 (72%)
 Frame = -2

Query: 651 RPNEATVVHWMHHCLYDITGSDLGTXXXXXXXXXXXXXIVEQDLSNGGNFLGRFVEALHY 472
           RP EA VVHWMHHCLYD+TGSDL T              VEQDLS+GG+FLGRFVEALHY
Sbjct: 272 RPREAIVVHWMHHCLYDVTGSDLETLKLLALLRPKLITTVEQDLSHGGSFLGRFVEALHY 331

Query: 471 Y 469
           Y
Sbjct: 332 Y 332


>gb|AFH54530.1| GRAS family protein, partial [Dimocarpus longan]
           gi|448278876|gb|AGE44290.1| GRAS4 protein [Dimocarpus
           longan]
          Length = 431

 Score =  200 bits (509), Expect(2) = 5e-69
 Identities = 96/111 (86%), Positives = 102/111 (91%)
 Frame = -3

Query: 467 ALFDALGDGQEWDSMERYQVEQHIFGSEIKNIVAVGGPKRTGEVKVERWGEELRRIGFNP 288
           ALFDALGD    DS++R+ VEQ +FG EI+NIVAVGGPKRTGEVKVERWGEELRR+GF P
Sbjct: 321 ALFDALGDKLGADSVDRHTVEQQLFGCEIRNIVAVGGPKRTGEVKVERWGEELRRVGFKP 380

Query: 287 VSLGGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 135
           VSL GNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD
Sbjct: 381 VSLSGNPAAQASLLLGMFPWKGYTLVEENGCLKLGWKDLSLLTASAWQPSD 431



 Score = 87.0 bits (214), Expect(2) = 5e-69
 Identities = 40/61 (65%), Positives = 44/61 (72%)
 Frame = -2

Query: 651 RPNEATVVHWMHHCLYDITGSDLGTXXXXXXXXXXXXXIVEQDLSNGGNFLGRFVEALHY 472
           +P+EA VVHWMHHCLYDITGSDL T              VEQDLS+ G+FLGRFVEALHY
Sbjct: 259 KPSEAIVVHWMHHCLYDITGSDLATLRLLTLLRPKLITTVEQDLSHAGSFLGRFVEALHY 318

Query: 471 Y 469
           Y
Sbjct: 319 Y 319


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