BLASTX nr result

ID: Coptis24_contig00033802 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033802
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]    84   9e-15
ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258...    79   5e-13
ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus c...    75   7e-12
ref|XP_002521003.1| hypothetical protein RCOM_0992860 [Ricinus c...    70   1e-10
ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|2...    67   2e-09

>emb|CAN75727.1| hypothetical protein VITISV_031407 [Vitis vinifera]
          Length = 778

 Score = 84.3 bits (207), Expect = 9e-15
 Identities = 59/144 (40%), Positives = 73/144 (50%), Gaps = 3/144 (2%)
 Frame = +2

Query: 2   VGTLGTEFECCDNQDHLLK-DPASGFSSKRHCSCCNEPWKLRLDAHRLLQPVGPEAAVLN 178
           VG LG + EC   Q   LK +        + CSCCN+PW+    A RLLQ     A    
Sbjct: 128 VGKLGLDLECLGFQRPFLKKESVLDSPDTKTCSCCNKPWRPGQIAQRLLQLRPTGAGFTK 187

Query: 179 VDLPATVEKKRVHLY--DGLKKSREKICRELSYSLGGCQSSDPLPHPVYSELKIASDSES 352
            D+P      R HL   D LKK R+K+   ++ S     +SD L H  YSELK  SDSES
Sbjct: 188 PDIPLHRLPGRSHLNHRDNLKKIRDKVSGSVTSSSPRNGASDHLSHVGYSELKFTSDSES 247

Query: 353 EVPFCDDDDDRDSLVHIEDNLKED 424
           EVP   DDD   SLVH +   K++
Sbjct: 248 EVPL-SDDDIVGSLVHEKSXRKQN 270


>ref|XP_002263011.1| PREDICTED: uncharacterized protein LOC100258654 [Vitis vinifera]
          Length = 877

 Score = 78.6 bits (192), Expect = 5e-13
 Identities = 50/128 (39%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
 Frame = +2

Query: 2   VGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLRLDAHRLLQP--VGPEAAVL 175
           VG LG +     + D +L++     SS RHCSCC++P+       RL Q   +  EAA L
Sbjct: 126 VGKLGEDTNSVLDHDPILEEYKPSSSSTRHCSCCSKPYIPSESDKRLFQTKSIESEAAEL 185

Query: 176 NVDLPATVEKKRVHLYDGLKKSREKICRELSYSLGGCQSSDPLPHPVYSELKIASDSESE 355
           ++ L   VE    H ++GLKK +      +     G +  DPL H  Y+ELKI SDSESE
Sbjct: 186 DLSLSGAVE----HSHEGLKKKQYIPSGSVGAPQLGSKRLDPLSHIGYTELKITSDSESE 241

Query: 356 VPFCDDDD 379
           +   DDDD
Sbjct: 242 ILLSDDDD 249


>ref|XP_002521947.1| hypothetical protein RCOM_0607680 [Ricinus communis]
           gi|223538751|gb|EEF40351.1| hypothetical protein
           RCOM_0607680 [Ricinus communis]
          Length = 1162

 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 50/141 (35%), Positives = 70/141 (49%)
 Frame = +2

Query: 2   VGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLRLDAHRLLQPVGPEAAVLNV 181
           VG LG  +    N+DH         SS +HCSCCNEPW LR     L+Q     +     
Sbjct: 129 VGKLGEGYRFGLNEDHT--------SSTQHCSCCNEPWILRGYVQNLMQTNIAGSETAEF 180

Query: 182 DLPATVEKKRVHLYDGLKKSREKICRELSYSLGGCQSSDPLPHPVYSELKIASDSESEVP 361
           D PA  ++  ++  +    +R  + R  S         D LPH  Y+ELK+ SD+ESEV 
Sbjct: 181 DAPAVYDQNNLNKIELSLPARATLQRSKS-------EFDHLPHIGYTELKVNSDTESEVL 233

Query: 362 FCDDDDDRDSLVHIEDNLKED 424
           F DDD++ ++  H   N K+D
Sbjct: 234 FSDDDNNTNARGH-AINTKQD 253


>ref|XP_002521003.1| hypothetical protein RCOM_0992860 [Ricinus communis]
           gi|223539840|gb|EEF41420.1| hypothetical protein
           RCOM_0992860 [Ricinus communis]
          Length = 802

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 43/127 (33%), Positives = 66/127 (51%), Gaps = 1/127 (0%)
 Frame = +2

Query: 2   VGTLGTEFECCDNQDHLLK-DPASGFSSKRHCSCCNEPWKLRLDAHRLLQPVGPEAAVLN 178
           +G  G +      Q+ L++ +   G    + CSCCN+PWK R +A++L     P + +  
Sbjct: 129 MGKFGFDLSAYSCQNALMRREFVPGSMGVQLCSCCNKPWKSRQNANKLPLAKPPRSGMT- 187

Query: 179 VDLPATVEKKRVHLYDGLKKSREKICRELSYSLGGCQSSDPLPHPVYSELKIASDSESEV 358
             LP     +R++ ++GLKK RE+     +    G     PL    Y ELKI S+SESE+
Sbjct: 188 --LPKIPLPRRLNHHEGLKKMRERFSGSATPGYLGKFGFGPLSPVGYKELKITSESESEI 245

Query: 359 PFCDDDD 379
           PF DD +
Sbjct: 246 PFSDDGE 252


>ref|XP_002332032.1| predicted protein [Populus trichocarpa] gi|222875257|gb|EEF12388.1|
           predicted protein [Populus trichocarpa]
          Length = 925

 Score = 66.6 bits (161), Expect = 2e-09
 Identities = 45/125 (36%), Positives = 64/125 (51%)
 Frame = +2

Query: 2   VGTLGTEFECCDNQDHLLKDPASGFSSKRHCSCCNEPWKLRLDAHRLLQPVGPEAAVLNV 181
           VG LG +     +QD  L D +S     R CSCCNEPW  R    +L++ +  ++   ++
Sbjct: 129 VGKLGEDSSFVLDQDSPLDDHSS---VTRQCSCCNEPWIPRGYCQKLMRAISVDSGAADL 185

Query: 182 DLPATVEKKRVHLYDGLKKSREKICRELSYSLGGCQSSDPLPHPVYSELKIASDSESEVP 361
           D+P +   K  H    LKKS++ I   +  +       D L H  Y+ELK  SD+ESEV 
Sbjct: 186 DVPLSGAIK--HDCSNLKKSKQSI--PIISTRQKTSGFDHLSHVGYTELKFNSDTESEVM 241

Query: 362 FCDDD 376
             DDD
Sbjct: 242 LSDDD 246


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