BLASTX nr result

ID: Coptis24_contig00033762 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033762
         (324 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003632865.1| PREDICTED: auxin-induced protein 22A-like [V...   101   6e-20
emb|CAN70530.1| hypothetical protein VITISV_010218 [Vitis vinifera]   101   6e-20
ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycin...    99   3e-19
gb|AEX00361.1| IAA19 [Solanum lycopersicum]                            97   1e-18
ref|XP_002299626.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18

>ref|XP_003632865.1| PREDICTED: auxin-induced protein 22A-like [Vitis vinifera]
           gi|313765829|gb|ADR80322.1| indole-3-acetic acid-induced
           protein 19 [Vitis vinifera]
          Length = 192

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/77 (59%), Positives = 64/77 (83%)
 Frame = -2

Query: 233 SMEKNGKKRVFSEITVEDENSSNTERKVQNKNEVVGWPPVCSYRKKNNVHEKYESKPSKI 54
           ++E+N KKRVFSE++  D +++  ERK QNKN+VVGWPPVCSYR+KN+ ++K  ++ +K+
Sbjct: 28  AVERNEKKRVFSEMS-GDSSATTCERKAQNKNQVVGWPPVCSYRRKNSFNDKDRTEATKM 86

Query: 53  YVKVGMDGTPFMRKIDL 3
           YVKV MDG PF+RKIDL
Sbjct: 87  YVKVSMDGAPFLRKIDL 103


>emb|CAN70530.1| hypothetical protein VITISV_010218 [Vitis vinifera]
          Length = 192

 Score =  101 bits (252), Expect = 6e-20
 Identities = 46/77 (59%), Positives = 64/77 (83%)
 Frame = -2

Query: 233 SMEKNGKKRVFSEITVEDENSSNTERKVQNKNEVVGWPPVCSYRKKNNVHEKYESKPSKI 54
           ++E+N KKRVFSE++  D +++  ERK QNKN+VVGWPPVCSYR+KN+ ++K  ++ +K+
Sbjct: 28  AVERNEKKRVFSEMS-GDSSATTCERKAQNKNQVVGWPPVCSYRRKNSFNDKDRTEATKM 86

Query: 53  YVKVGMDGTPFMRKIDL 3
           YVKV MDG PF+RKIDL
Sbjct: 87  YVKVSMDGAPFLRKIDL 103


>ref|NP_001242293.1| uncharacterized protein LOC100811879 [Glycine max]
           gi|255642213|gb|ACU21371.1| unknown [Glycine max]
          Length = 187

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 50/79 (63%), Positives = 59/79 (74%), Gaps = 1/79 (1%)
 Frame = -2

Query: 236 PSMEKNGKKRVFSEITVEDENSSNTE-RKVQNKNEVVGWPPVCSYRKKNNVHEKYESKPS 60
           P   +  KKRVFSEI   DENSS+ E RK+Q KN+VVGWPPVCSYRKKN ++E      +
Sbjct: 24  PDKNEKMKKRVFSEINQGDENSSSEEDRKIQTKNQVVGWPPVCSYRKKNTINE------T 77

Query: 59  KIYVKVGMDGTPFMRKIDL 3
           K+YVKV MDG PF+RKIDL
Sbjct: 78  KMYVKVSMDGAPFLRKIDL 96


>gb|AEX00361.1| IAA19 [Solanum lycopersicum]
          Length = 192

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 47/85 (55%), Positives = 59/85 (69%), Gaps = 9/85 (10%)
 Frame = -2

Query: 230 MEKNGKKRVFSEITVEDENSSNTER---------KVQNKNEVVGWPPVCSYRKKNNVHEK 78
           +EKN KKRV+SEIT  D NSS++           K Q KNEVVGWPPVC+YRKKN+ + +
Sbjct: 19  LEKNEKKRVYSEITTSDRNSSSSNNNNNVEANNYKCQYKNEVVGWPPVCAYRKKNSFNGR 78

Query: 77  YESKPSKIYVKVGMDGTPFMRKIDL 3
                +K+YVKV MDG PF+RK+DL
Sbjct: 79  EAESNNKMYVKVSMDGAPFLRKVDL 103


>ref|XP_002299626.1| predicted protein [Populus trichocarpa] gi|222846884|gb|EEE84431.1|
           predicted protein [Populus trichocarpa]
          Length = 189

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 47/74 (63%), Positives = 57/74 (77%)
 Frame = -2

Query: 224 KNGKKRVFSEITVEDENSSNTERKVQNKNEVVGWPPVCSYRKKNNVHEKYESKPSKIYVK 45
           KN KKRVFSE++ E  NS+   RK Q  ++VVGWPPVCSYRKKN+ +EK   + SKIYVK
Sbjct: 24  KNEKKRVFSELSGE-ANSTTDGRKTQTTSQVVGWPPVCSYRKKNSFNEKDSHETSKIYVK 82

Query: 44  VGMDGTPFMRKIDL 3
           V MDG PF+RK+DL
Sbjct: 83  VSMDGAPFLRKVDL 96


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