BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033642
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807...    97   1e-18
ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|35549942...    86   2e-15
ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis] gi...    82   6e-14
ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266...    80   1e-13
emb|CBI33596.3| unnamed protein product [Vitis vinifera]               80   1e-13

>ref|XP_003551833.1| PREDICTED: uncharacterized protein LOC100807673 [Glycine max]
          Length = 1402

 Score = 97.1 bits (240), Expect = 1e-18
 Identities = 56/128 (43%), Positives = 79/128 (61%), Gaps = 2/128 (1%)
 Frame = -1

Query: 382 QMLNLLTSSGGDIVEAVSEFYERETEFHEQVAACITPNALIPTNSQS--NSALLPESPTR 209
           Q+L+L++ SG +++EAVS FYERETEFHEQV +C TP +     S +  +S   P   T 
Sbjct: 497 QLLDLISISGSNVIEAVSNFYERETEFHEQVISCQTPVSTSKCCSLNGMDSLAKPCLNTN 556

Query: 208 ATDRQSVMSTLSQVKKLPDMKHSVKGTVSPKKRGSPSDKTSRKKARSSLAPEPSGSKQPA 29
            T + ++    SQ  KL +++H+V   +SP KR   +D    KKA+     EPSGSKQ  
Sbjct: 557 NTGK-NIDIFPSQDSKLTNLRHTVPSPISPAKRKRSTDSKQNKKAKVKAKSEPSGSKQAT 615

Query: 28  ITKFFSKL 5
           IT+FFSK+
Sbjct: 616 ITRFFSKV 623


>ref|XP_003624408.1| DNA ligase [Medicago truncatula] gi|355499423|gb|AES80626.1| DNA
           ligase [Medicago truncatula]
          Length = 1498

 Score = 86.3 bits (212), Expect = 2e-15
 Identities = 56/146 (38%), Positives = 77/146 (52%), Gaps = 21/146 (14%)
 Frame = -1

Query: 382 QMLNLLTSSGGDIVEAVSEFYERETEFHEQVAACITPNALIPTN---------------- 251
           QML+L++ SG ++VEAVS F+ERETEFHEQV +  TP   +PT+                
Sbjct: 487 QMLDLISISGSNVVEAVSNFFERETEFHEQVNSSQTP---VPTHRSCSSNDTSPLSKSNL 543

Query: 250 -SQSNSALLPESPTRATDRQSVMSTL----SQVKKLPDMKHSVKGTVSPKKRGSPSDKTS 86
            S S++   P S +   +  S    L    SQ  KL +++ ++   +SP KR   S+  S
Sbjct: 544 KSFSSNDASPFSKSNLNNTNSTTKKLDLFRSQESKLTNLRKALSNQISPSKRKKGSESKS 603

Query: 85  RKKARSSLAPEPSGSKQPAITKFFSK 8
            KK +     E SGSKQ  ITKFF K
Sbjct: 604 NKKVKVKAKSESSGSKQATITKFFGK 629


>ref|XP_002528057.1| DNA ligase I, putative [Ricinus communis]
           gi|223532518|gb|EEF34307.1| DNA ligase I, putative
           [Ricinus communis]
          Length = 1360

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 51/128 (39%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
 Frame = -1

Query: 382 QMLNLLTSSGGDIVEAVSEFYERETEFHEQVAACITPNALIPTNS--QSNSALLPESPTR 209
           QML+L+ SS G +V+AVS F+E ETEFH+QV AC T  +   T S  +S S   P    R
Sbjct: 482 QMLHLIGSSRGSLVDAVSNFHEHETEFHQQVFACGTAISSSQTGSIHESESHSKPILIKR 541

Query: 208 ATDRQSVMSTLSQVKKLPDMKHSVKGTVSPKKRGSPSDKTSRKKARSSLAPEPSGSKQPA 29
           + +  S  S+ +      ++K S+K  +SP K+   ++    KK ++    E  G KQP 
Sbjct: 542 SQESLSTPSSQNYKSSKSNVKPSIKSGMSPGKKKRIAEIMPSKKVKTKSKLESGGRKQPT 601

Query: 28  ITKFFSKL 5
           IT FFSKL
Sbjct: 602 ITSFFSKL 609


>ref|XP_002266168.2| PREDICTED: uncharacterized protein LOC100266816 [Vitis vinifera]
          Length = 1449

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 QMLNLLTSSGGDIVEAVSEFYERETEFHEQVAACITPNALIPTNSQSNSALLPESPTRAT 203
           QML+LL+ S G+++EAVS FYERETEF EQV           T+S  +S  L +  +  +
Sbjct: 540 QMLDLLSCSDGNVIEAVSNFYERETEFREQVIGHTNSVCTSQTSSLKDSVSLSKLGSVGS 599

Query: 202 DRQSVMSTL-SQVKKLPDMKHSVK-GTVSPKKRGSPSDKTSRKKARSSLAPEPSGSKQPA 29
             Q +     SQ   L +++ S+K  ++S  KR    DK S KK +    PE  GSKQ  
Sbjct: 600 SPQKMEDIHGSQSYSLLNIRSSMKSSSLSSGKRKKNLDKKSIKKGKVGSKPESGGSKQST 659

Query: 28  ITKFFSKLA 2
           IT+FFSK+A
Sbjct: 660 ITRFFSKIA 668


>emb|CBI33596.3| unnamed protein product [Vitis vinifera]
          Length = 1390

 Score = 80.5 bits (197), Expect = 1e-13
 Identities = 53/129 (41%), Positives = 73/129 (56%), Gaps = 2/129 (1%)
 Frame = -1

Query: 382 QMLNLLTSSGGDIVEAVSEFYERETEFHEQVAACITPNALIPTNSQSNSALLPESPTRAT 203
           QML+LL+ S G+++EAVS FYERETEF EQV           T+S  +S  L +  +  +
Sbjct: 481 QMLDLLSCSDGNVIEAVSNFYERETEFREQVIGHTNSVCTSQTSSLKDSVSLSKLGSVGS 540

Query: 202 DRQSVMSTL-SQVKKLPDMKHSVK-GTVSPKKRGSPSDKTSRKKARSSLAPEPSGSKQPA 29
             Q +     SQ   L +++ S+K  ++S  KR    DK S KK +    PE  GSKQ  
Sbjct: 541 SPQKMEDIHGSQSYSLLNIRSSMKSSSLSSGKRKKNLDKKSIKKGKVGSKPESGGSKQST 600

Query: 28  ITKFFSKLA 2
           IT+FFSK+A
Sbjct: 601 ITRFFSKIA 609