BLASTX nr result

ID: Coptis24_contig00033632 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033632
         (236 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002873109.1| hypothetical protein ARALYDRAFT_487149 [Arab...    92   4e-17
ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5...    92   6e-17
emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]    92   6e-17
ref|XP_002528591.1| ATP binding protein, putative [Ricinus commu...    91   1e-16
ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|2...    89   4e-16

>ref|XP_002873109.1| hypothetical protein ARALYDRAFT_487149 [Arabidopsis lyrata subsp.
           lyrata] gi|297318946|gb|EFH49368.1| hypothetical protein
           ARALYDRAFT_487149 [Arabidopsis lyrata subsp. lyrata]
          Length = 377

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/72 (58%), Positives = 57/72 (79%)
 Frame = -2

Query: 217 WSTQSANGNTLLLHNNSNLQILDSDSVITWQSFDHPTNTLVQNQNFTSEMSLVSSNGQFE 38
           WST + NG+ L+L N+SNLQ++ + S + W+SFD P NTLV+NQNFTS M+LVS NG + 
Sbjct: 123 WSTHT-NGDRLILRNDSNLQVVKTSSFVEWESFDFPGNTLVENQNFTSAMALVSPNGLYS 181

Query: 37  MKLGDNFIGLYS 2
           M+LG +FIGLY+
Sbjct: 182 MRLGSDFIGLYA 193


>ref|XP_002283448.1| PREDICTED: PAN domain-containing protein At5g03700 [Vitis vinifera]
           gi|297740069|emb|CBI30251.3| unnamed protein product
           [Vitis vinifera]
          Length = 485

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = -2

Query: 223 VLWSTQSANGNTLLLHNNSNLQI--LDSDSVITWQSFDHPTNTLVQNQNFTSEMSLVSSN 50
           V WST   NG+ +LL N SNLQI  LD    + WQSF  PTNTLV+NQNFT  MSLVSSN
Sbjct: 119 VFWST-GTNGDRILLLNTSNLQIQKLDKSPTVLWQSFHFPTNTLVENQNFTVNMSLVSSN 177

Query: 49  GQFEMKLGDNFIGLY 5
           G + M+LG++FIGLY
Sbjct: 178 GLYSMRLGEDFIGLY 192


>emb|CAN62313.1| hypothetical protein VITISV_018205 [Vitis vinifera]
          Length = 490

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 47/75 (62%), Positives = 55/75 (73%), Gaps = 2/75 (2%)
 Frame = -2

Query: 223 VLWSTQSANGNTLLLHNNSNLQI--LDSDSVITWQSFDHPTNTLVQNQNFTSEMSLVSSN 50
           V WST   NG+ +LL N SNLQI  LD    + WQSF  PTNTLV+NQNFT  MSLVSSN
Sbjct: 119 VFWST-GTNGDRILLLNTSNLQIQKLDKSPTVIWQSFHFPTNTLVENQNFTVNMSLVSSN 177

Query: 49  GQFEMKLGDNFIGLY 5
           G + M+LG++FIGLY
Sbjct: 178 GLYSMRLGEDFIGLY 192


>ref|XP_002528591.1| ATP binding protein, putative [Ricinus communis]
           gi|223531987|gb|EEF33799.1| ATP binding protein,
           putative [Ricinus communis]
          Length = 491

 Score = 90.5 bits (223), Expect = 1e-16
 Identities = 43/78 (55%), Positives = 61/78 (78%)
 Frame = -2

Query: 235 SHEGVLWSTQSANGNTLLLHNNSNLQILDSDSVITWQSFDHPTNTLVQNQNFTSEMSLVS 56
           SH G+ WST++  G+ ++L N SNLQIL  ++ + WQSFD+PTNTLV+NQN TS+MSLVS
Sbjct: 114 SHTGLTWSTET-QGDKVILLNTSNLQILKHEASV-WQSFDYPTNTLVENQNLTSDMSLVS 171

Query: 55  SNGQFEMKLGDNFIGLYS 2
            NG + ++LG+ F+ LY+
Sbjct: 172 LNGVYSLRLGETFMALYA 189


>ref|XP_002311933.1| predicted protein [Populus trichocarpa] gi|222851753|gb|EEE89300.1|
           predicted protein [Populus trichocarpa]
          Length = 487

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 45/78 (57%), Positives = 58/78 (74%), Gaps = 1/78 (1%)
 Frame = -2

Query: 232 HEGVLWST-QSANGNTLLLHNNSNLQILDSDSVITWQSFDHPTNTLVQNQNFTSEMSLVS 56
           H+   WST  S  G+ ++L N+SNLQIL    V+ WQSFD PT+TLV+NQNFTS MSLVS
Sbjct: 116 HKRSFWSTGTSQQGDKVVLLNSSNLQILQKQ-VVLWQSFDFPTSTLVENQNFTSNMSLVS 174

Query: 55  SNGQFEMKLGDNFIGLYS 2
            NG + M+LGD+F+ LY+
Sbjct: 175 PNGLYSMRLGDDFMALYA 192


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