BLASTX nr result

ID: Coptis24_contig00033609 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033609
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281738.2| PREDICTED: uncharacterized protein LOC100255...   165   4e-39
ref|XP_002521833.1| ATP binding protein, putative [Ricinus commu...   156   1e-36
emb|CBI32470.3| unnamed protein product [Vitis vinifera]              154   7e-36
ref|XP_002330271.1| predicted protein [Populus trichocarpa] gi|2...   149   2e-34
ref|XP_003520174.1| PREDICTED: uncharacterized protein LOC100809...   133   1e-29

>ref|XP_002281738.2| PREDICTED: uncharacterized protein LOC100255624 [Vitis vinifera]
          Length = 2959

 Score =  165 bits (417), Expect = 4e-39
 Identities = 87/136 (63%), Positives = 103/136 (75%)
 Frame = -2

Query: 436  NIKARRELEMCRVLKGKLLVDIKNSYDRILRKEDEAGRLSAKLSSFEKKILDLQFQEELM 257
            N K R+ELEMCR+LKGKLL DIKNS+DRI RKE+E G L  KL++FEKKILDLQ QEE M
Sbjct: 1759 NFKTRQELEMCRILKGKLLADIKNSFDRISRKEEETGELRIKLTAFEKKILDLQLQEESM 1818

Query: 256  LDRSDSMGSELSLLMKELDLHNSNALEAFSAQEKLLRDNQELTKSQFESLTTELISKDFE 77
            L RS+ MGSEL++LMKELDL NSN L +   Q+KLL+D  E+ KSQ ES   +L SKD E
Sbjct: 1819 LHRSNYMGSELAVLMKELDLSNSNILASLLDQQKLLQDKDEVIKSQAESFMIDLYSKDIE 1878

Query: 76   SLIFASELLQMGHERA 29
            SLI  SEL  M  ++A
Sbjct: 1879 SLILTSELEHMALQKA 1894


>ref|XP_002521833.1| ATP binding protein, putative [Ricinus communis]
            gi|223538871|gb|EEF40469.1| ATP binding protein, putative
            [Ricinus communis]
          Length = 2970

 Score =  156 bits (395), Expect = 1e-36
 Identities = 78/135 (57%), Positives = 104/135 (77%)
 Frame = -2

Query: 436  NIKARRELEMCRVLKGKLLVDIKNSYDRILRKEDEAGRLSAKLSSFEKKILDLQFQEELM 257
            N ++ REL+MCR LKGKLL DIKNS+DRILRKE+E G L+ ++++FEKKI DLQ QEE+M
Sbjct: 1757 NSRSSRELQMCRTLKGKLLADIKNSFDRILRKEEETGELNTRITTFEKKIFDLQLQEEIM 1816

Query: 256  LDRSDSMGSELSLLMKELDLHNSNALEAFSAQEKLLRDNQELTKSQFESLTTELISKDFE 77
            L RS+ MGS+LS+LMK+LD  N N +E+   QEK+L+DN+EL  SQ E    EL SKD E
Sbjct: 1817 LQRSNYMGSQLSILMKDLDFGNRN-IESLLGQEKMLKDNEELLNSQAELFMVELCSKDIE 1875

Query: 76   SLIFASELLQMGHER 32
            SL+ A++L +M  ++
Sbjct: 1876 SLVLATQLEEMSFKK 1890


>emb|CBI32470.3| unnamed protein product [Vitis vinifera]
          Length = 2686

 Score =  154 bits (389), Expect = 7e-36
 Identities = 81/131 (61%), Positives = 98/131 (74%)
 Frame = -2

Query: 436  NIKARRELEMCRVLKGKLLVDIKNSYDRILRKEDEAGRLSAKLSSFEKKILDLQFQEELM 257
            N K R+ELEMCR+LKGKLL DIKNS+DRI RKE+E G L  KL++FEKKILDLQ QEE M
Sbjct: 1646 NFKTRQELEMCRILKGKLLADIKNSFDRISRKEEETGELRIKLTAFEKKILDLQLQEESM 1705

Query: 256  LDRSDSMGSELSLLMKELDLHNSNALEAFSAQEKLLRDNQELTKSQFESLTTELISKDFE 77
            L RS+ MGSEL++LMKELDL NSN L +   Q+KLL+D  E+ KSQ ES   +L SKD +
Sbjct: 1706 LHRSNYMGSELAVLMKELDLSNSNILASLLDQQKLLQDKDEVIKSQAESFMIDLYSKDID 1765

Query: 76   SLIFASELLQM 44
             L+ A   L +
Sbjct: 1766 ELMEAKMRLMI 1776


>ref|XP_002330271.1| predicted protein [Populus trichocarpa] gi|222871306|gb|EEF08437.1|
            predicted protein [Populus trichocarpa]
          Length = 2731

 Score =  149 bits (376), Expect = 2e-34
 Identities = 79/131 (60%), Positives = 96/131 (73%)
 Frame = -2

Query: 436  NIKARRELEMCRVLKGKLLVDIKNSYDRILRKEDEAGRLSAKLSSFEKKILDLQFQEELM 257
            N K  REL+ CR LKGKLL DIKNS+ RILRKE+E  R   KL+SFEKKI D+Q QEELM
Sbjct: 1676 NSKTSRELQTCRTLKGKLLADIKNSFVRILRKEEETERFGLKLTSFEKKISDIQLQEELM 1735

Query: 256  LDRSDSMGSELSLLMKELDLHNSNALEAFSAQEKLLRDNQELTKSQFESLTTELISKDFE 77
            L RS+ MGS+L++LMKELD  N+NA+E+   QEK+L D +EL  SQ E    +L SKD E
Sbjct: 1736 LQRSNYMGSQLAVLMKELDSTNTNAVESLFNQEKMLEDEKELRNSQTELFMMDLCSKDIE 1795

Query: 76   SLIFASELLQM 44
            S I AS+L +M
Sbjct: 1796 SFILASQLEEM 1806


>ref|XP_003520174.1| PREDICTED: uncharacterized protein LOC100809655 [Glycine max]
          Length = 2881

 Score =  133 bits (335), Expect = 1e-29
 Identities = 68/131 (51%), Positives = 94/131 (71%)
 Frame = -2

Query: 436  NIKARRELEMCRVLKGKLLVDIKNSYDRILRKEDEAGRLSAKLSSFEKKILDLQFQEELM 257
            N + ++EL+MCR+LKGKLL DIKNS+DRI +KE EAG ++ KL++F K I DLQ QEE+M
Sbjct: 1837 NYRTKQELDMCRILKGKLLADIKNSFDRINKKEVEAGEITIKLNNFAKSISDLQLQEEMM 1896

Query: 256  LDRSDSMGSELSLLMKELDLHNSNALEAFSAQEKLLRDNQELTKSQFESLTTELISKDFE 77
            L RS+ MGS+L+ LM+ELD+ N++ + +   QEKLL+      + + E    +  +KDFE
Sbjct: 1897 LQRSNEMGSQLAKLMRELDVSNTDIVTSLLDQEKLLKQKVVAIECEAEFFMADWYAKDFE 1956

Query: 76   SLIFASELLQM 44
            SLI ASEL  M
Sbjct: 1957 SLIHASELKNM 1967


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