BLASTX nr result

ID: Coptis24_contig00033595 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033595
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331954.1| NAC domain protein, IPR003441 [Populus trich...    55   8e-06

>ref|XP_002331954.1| NAC domain protein, IPR003441 [Populus trichocarpa]
           gi|222874731|gb|EEF11862.1| NAC domain protein,
           IPR003441 [Populus trichocarpa]
          Length = 336

 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 24/45 (53%), Positives = 34/45 (75%)
 Frame = -3

Query: 182 GWRFIPTDEELVINYLNKKILNSNFQYPIITDVEIYAYHPQNLIG 48
           G+RF PTD+EL+I+YL KK+ +SN +  II DV+IY ++P  L G
Sbjct: 9   GFRFHPTDQELIIHYLRKKVSSSNLEVVIIADVDIYKFNPWELPG 53


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