BLASTX nr result

ID: Coptis24_contig00033547 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033547
         (243 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304333.1| predicted protein [Populus trichocarpa] gi|2...   140   8e-32
ref|XP_004142048.1| PREDICTED: serine/threonine-protein kinase/e...   139   2e-31
ref|XP_002275036.1| PREDICTED: uncharacterized protein LOC100249...   139   2e-31
ref|XP_002521737.1| kinase, putative [Ricinus communis] gi|22353...   137   9e-31
emb|CBI40743.3| unnamed protein product [Vitis vinifera]              135   4e-30

>ref|XP_002304333.1| predicted protein [Populus trichocarpa] gi|222841765|gb|EEE79312.1|
           predicted protein [Populus trichocarpa]
          Length = 822

 Score =  140 bits (354), Expect = 8e-32
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = +2

Query: 2   GSNGTIVLEGMCDGRMVAVKRLVQAHHDVAYKEIQHLIASDRHPNIVRWFGVEIDLDFVY 181
           GSNGT+VLEG+ +GR+VAVKRLVQ HHDVA+KEIQ+LIASDRHPNIVRW+GVE D DFVY
Sbjct: 404 GSNGTVVLEGVYEGRLVAVKRLVQTHHDVAWKEIQNLIASDRHPNIVRWYGVEYDEDFVY 463

Query: 182 LSLERCTCSLNDLIQICSDS 241
           LSLERCTCSL+DLIQI SDS
Sbjct: 464 LSLERCTCSLDDLIQIYSDS 483


>ref|XP_004142048.1| PREDICTED: serine/threonine-protein kinase/endoribonuclease
           ire-1-like [Cucumis sativus]
           gi|449497731|ref|XP_004160500.1| PREDICTED:
           serine/threonine-protein kinase/endoribonuclease
           ire-1-like [Cucumis sativus]
          Length = 942

 Score =  139 bits (351), Expect = 2e-31
 Identities = 65/79 (82%), Positives = 74/79 (93%)
 Frame = +2

Query: 2   GSNGTIVLEGMCDGRMVAVKRLVQAHHDVAYKEIQHLIASDRHPNIVRWFGVEIDLDFVY 181
           GSNGTIVLEG+ +GR+VAVKRLV+ HHDVA+KE+Q+LIASDRH NIVRW+GVE D DFVY
Sbjct: 524 GSNGTIVLEGVYEGRLVAVKRLVKTHHDVAFKEVQNLIASDRHQNIVRWYGVEYDQDFVY 583

Query: 182 LSLERCTCSLNDLIQICSD 238
           LSLERCTCSL+DLIQICSD
Sbjct: 584 LSLERCTCSLDDLIQICSD 602


>ref|XP_002275036.1| PREDICTED: uncharacterized protein LOC100249111 [Vitis vinifera]
          Length = 957

 Score =  139 bits (350), Expect = 2e-31
 Identities = 67/80 (83%), Positives = 75/80 (93%)
 Frame = +2

Query: 2   GSNGTIVLEGMCDGRMVAVKRLVQAHHDVAYKEIQHLIASDRHPNIVRWFGVEIDLDFVY 181
           GSNGTIVLEG+ +GR VAVKRLV+AHHDVA+KEIQ+LIASDRHPNIVRW+GVE D DFVY
Sbjct: 541 GSNGTIVLEGIHEGRSVAVKRLVRAHHDVAFKEIQNLIASDRHPNIVRWYGVEYDQDFVY 600

Query: 182 LSLERCTCSLNDLIQICSDS 241
           LSLERCTCSLNDL+QI S+S
Sbjct: 601 LSLERCTCSLNDLLQIHSNS 620


>ref|XP_002521737.1| kinase, putative [Ricinus communis] gi|223539128|gb|EEF40724.1|
           kinase, putative [Ricinus communis]
          Length = 911

 Score =  137 bits (345), Expect = 9e-31
 Identities = 67/80 (83%), Positives = 74/80 (92%)
 Frame = +2

Query: 2   GSNGTIVLEGMCDGRMVAVKRLVQAHHDVAYKEIQHLIASDRHPNIVRWFGVEIDLDFVY 181
           GSNGTIVLEG+ +GR VAVKRLVQAHH+VA+KEIQ+LIASDRHPNIVRW+GVE D DFVY
Sbjct: 493 GSNGTIVLEGIYEGRPVAVKRLVQAHHEVAFKEIQNLIASDRHPNIVRWYGVENDNDFVY 552

Query: 182 LSLERCTCSLNDLIQICSDS 241
           LSLERCTCSL+DLIQI  DS
Sbjct: 553 LSLERCTCSLDDLIQIYCDS 572


>emb|CBI40743.3| unnamed protein product [Vitis vinifera]
          Length = 827

 Score =  135 bits (339), Expect = 4e-30
 Identities = 65/80 (81%), Positives = 71/80 (88%)
 Frame = +2

Query: 2   GSNGTIVLEGMCDGRMVAVKRLVQAHHDVAYKEIQHLIASDRHPNIVRWFGVEIDLDFVY 181
           GSNGTIVLEG+ DGR VAVKRLV+ HHDVA KEIQ+LIASD+HPNIVRW GVE D DFVY
Sbjct: 434 GSNGTIVLEGIYDGRPVAVKRLVRTHHDVALKEIQNLIASDQHPNIVRWHGVEYDQDFVY 493

Query: 182 LSLERCTCSLNDLIQICSDS 241
           LSLERC CSL+DLI +CSDS
Sbjct: 494 LSLERCNCSLSDLIYLCSDS 513


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