BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033531
         (670 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37137.3| unnamed protein product [Vitis vinifera]              178   1e-42
ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-...   178   1e-42
emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]   165   6e-39
ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cu...   139   5e-31
ref|XP_003541362.1| PREDICTED: DNA repair and recombination prot...   131   1e-28

>emb|CBI37137.3| unnamed protein product [Vitis vinifera]
          Length = 1116

 Score =  178 bits (451), Expect = 1e-42
 Identities = 105/202 (51%), Positives = 127/202 (62%), Gaps = 10/202 (4%)
 Frame = +3

Query: 93  EEEDRILFSGLGVTSANPEDIERDILAEATDKV---GEAGGSIEEQLLDNEKVGDXXXXX 263
           EEEDRIL S LGVTSANPED+ER+ILA AT++     EAG S EE+ LD  K  +     
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTS 62

Query: 264 RVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATNS 443
           + KL SKLRA+EVEIDAVA + +QA +   NE + S   DN  Q   EDDK  I+ + N+
Sbjct: 63  QAKLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNN 122

Query: 444 LNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXXXXXXXXXXXVKEEVKPKRKLKE 602
           L LQHALA DRLRSLKKTK QL       Q                 VKEE +PK++LKE
Sbjct: 123 LTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKE 182

Query: 603 AQASKKDTKKRQKTVSYDEDVD 668
              S KD KKR+KT+S+D+DVD
Sbjct: 183 IPKSGKDLKKRKKTISFDDDVD 204


>ref|XP_002272543.1| PREDICTED: DNA excision repair protein ERCC-6-like [Vitis vinifera]
          Length = 1227

 Score =  178 bits (451), Expect = 1e-42
 Identities = 105/202 (51%), Positives = 127/202 (62%), Gaps = 10/202 (4%)
 Frame = +3

Query: 93  EEEDRILFSGLGVTSANPEDIERDILAEATDKV---GEAGGSIEEQLLDNEKVGDXXXXX 263
           EEEDRIL S LGVTSANPED+ER+ILA AT++     EAG S EE+ LD  K  +     
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAATNEAENGSEAGRSTEEEFLDKSKATELSSTS 62

Query: 264 RVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATNS 443
           + KL SKLRA+EVEIDAVA + +QA +   NE + S   DN  Q   EDDK  I+ + N+
Sbjct: 63  QAKLYSKLRALEVEIDAVAYTVQQARNTERNENHVSHGNDNRAQGDAEDDKLVIQASPNN 122

Query: 444 LNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXXXXXXXXXXXVKEEVKPKRKLKE 602
           L LQHALA DRLRSLKKTK QL       Q                 VKEE +PK++LKE
Sbjct: 123 LTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTVEHDKVIQNLVKEEARPKKRLKE 182

Query: 603 AQASKKDTKKRQKTVSYDEDVD 668
              S KD KKR+KT+S+D+DVD
Sbjct: 183 IPKSGKDLKKRKKTISFDDDVD 204


>emb|CAN67815.1| hypothetical protein VITISV_002502 [Vitis vinifera]
          Length = 1249

 Score =  165 bits (418), Expect = 6e-39
 Identities = 105/224 (46%), Positives = 127/224 (56%), Gaps = 32/224 (14%)
 Frame = +3

Query: 93  EEEDRILFSGLGVTSANPEDIERDILA----------------------EATDKV---GE 197
           EEEDRIL S LGVTSANPED+ER+ILA                      EAT++     E
Sbjct: 3   EEEDRILLSSLGVTSANPEDVEREILAAYIDHIVPLGCRSVRVSFSNEPEATNEAENGSE 62

Query: 198 AGGSIEEQLLDNEKVGDXXXXXRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGS 377
           AG S EE+ LD  K  +     + KL SKL A+EVEIDAVA + +QA +   NE + S  
Sbjct: 63  AGRSTEEEFLDKSKATELSSTSQAKLYSKLXALEVEIDAVAYTVQQARNTERNENHVSHG 122

Query: 378 IDNGEQEGKEDDKNDIRNATNSLNLQHALAKDRLRSLKKTKVQL-------QNXXXXXXX 536
            DN  Q   EDDK  I+ + N+L LQHALA DRLRSLKKTK QL       Q        
Sbjct: 123 NDNRAQGDAEDDKLVIQASPNNLTLQHALAADRLRSLKKTKAQLEIELSDWQKEKPSKTV 182

Query: 537 XXXXXXXXXVKEEVKPKRKLKEAQASKKDTKKRQKTVSYDEDVD 668
                    VKEE +PK++LKE   S KD KKR+KT+S+D+DVD
Sbjct: 183 EHDKVIQNLVKEEARPKKRLKEIPKSGKDLKKRKKTISFDDDVD 226


>ref|XP_004151991.1| PREDICTED: DNA repair protein rhp26-like [Cucumis sativus]
           gi|449522123|ref|XP_004168077.1| PREDICTED: DNA repair
           protein rhp26-like [Cucumis sativus]
          Length = 1221

 Score =  139 bits (350), Expect = 5e-31
 Identities = 90/196 (45%), Positives = 108/196 (55%), Gaps = 3/196 (1%)
 Frame = +3

Query: 90  EEEEDRILFSGLGVTSANPEDIERDILAEATDKVG---EAGGSIEEQLLDNEKVGDXXXX 260
           EE EDRI  + LGVTSANPEDIERD+L EA  K     E GG  EE + D     D    
Sbjct: 2   EEVEDRIFLNSLGVTSANPEDIERDLLNEAKKKSENGVEVGGIEEENVCDKLDTTDSPSA 61

Query: 261 XRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNATN 440
             V+L  KLRAVE EIDAVA++ E       NE++   S D+ +   +ED       + +
Sbjct: 62  SHVQLYQKLRAVEYEIDAVASTVEPGEKLERNEQHSCVSTDSQKHAREEDSV-----SAS 116

Query: 441 SLNLQHALAKDRLRSLKKTKVQLQNXXXXXXXXXXXXXXXXVKEEVKPKRKLKEAQASKK 620
              LQHALA DRLRSLKKT+ QL+N                VK+  KPKRK KE + S  
Sbjct: 117 GDGLQHALAVDRLRSLKKTQHQLKNELFHLNDKHAKTILEIVKDRSKPKRKSKEVKKSGN 176

Query: 621 DTKKRQKTVSYDEDVD 668
           D  KR K VS+DED D
Sbjct: 177 DGGKRLKVVSFDEDND 192


>ref|XP_003541362.1| PREDICTED: DNA repair and recombination protein RAD26-like [Glycine
           max]
          Length = 1210

 Score =  131 bits (330), Expect = 1e-28
 Identities = 89/204 (43%), Positives = 116/204 (56%), Gaps = 11/204 (5%)
 Frame = +3

Query: 90  EEEEDRILFSGLGVTSANPEDIERDILAEATDK----VGEAGGSIEEQLLDNEKVGDXXX 257
           EEEEDRIL S LGV SANPEDIERD+L +AT      V E  GS +E+  D  +  D   
Sbjct: 2   EEEEDRILLSSLGVKSANPEDIERDVLEKATRNDLVTVTEVEGSAKEERSDLPENVDPSA 61

Query: 258 XXRVKLQSKLRAVEVEIDAVAASFEQASSRVENEEYFSGSIDNGEQEGKEDDKNDIRNAT 437
             + +++ KLRAV+ EIDAVA++ E+ S+ VE+ E  S + ++G   G  + ++D     
Sbjct: 62  NDKAEIRQKLRAVQFEIDAVASAVERLSN-VEDNEECSDAGEDGPGRGTAEGESD----- 115

Query: 438 NSLNLQHALAKDRLRSLKKTKVQLQ-------NXXXXXXXXXXXXXXXXVKEEVKPKRKL 596
            + NLQ ALA DRLRSL+KTK QL+                        VKEE K KRK+
Sbjct: 116 GNSNLQRALAADRLRSLEKTKAQLEKELLDLFKDDDSKSAEHEELVLSLVKEERKSKRKV 175

Query: 597 KEAQASKKDTKKRQKTVSYDEDVD 668
           KE +   K   KR K VS+DED D
Sbjct: 176 KEDKKLNKSAGKRPKKVSFDEDAD 199