BLASTX nr result

ID: Coptis24_contig00033487 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033487
         (571 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|2...   141   9e-32
ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|2...   131   7e-29
ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|2...   120   2e-25
ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycin...   115   5e-24
gb|AFK45841.1| unknown [Lotus japonicus]                              114   1e-23

>ref|XP_002302996.1| predicted protein [Populus trichocarpa] gi|222844722|gb|EEE82269.1|
           predicted protein [Populus trichocarpa]
          Length = 138

 Score =  141 bits (355), Expect = 9e-32
 Identities = 72/128 (56%), Positives = 93/128 (72%), Gaps = 3/128 (2%)
 Frame = +1

Query: 73  FYGSLKRYWRRRQYQRIDGAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 246
           FYGS KRYWRR++YQR DGAIT  KN K  R GG  +R WKIK  PKL+    I SP+KL
Sbjct: 8   FYGSWKRYWRRKRYQRFDGAITARKNIKVTRFGGSPRRVWKIKAVPKLRILKSIASPLKL 67

Query: 247 MAKLRDAYINMMLGLAGNVGSLSGDNFFGGKRIPRARKISKVS-KTDVFETKLIFEIYKA 423
           M+KL++AYINMMLG+AGNV    G N FG +R+PR R++   +  ++ FE +L++EIYK 
Sbjct: 68  MSKLKNAYINMMLGMAGNV---DGTNVFGNRRVPRGRQVKAPNYPSEAFEKRLVYEIYKN 124

Query: 424 LKASRELA 447
           L A+REL+
Sbjct: 125 LLATRELS 132


>ref|XP_002305180.1| predicted protein [Populus trichocarpa] gi|222848144|gb|EEE85691.1|
           predicted protein [Populus trichocarpa]
          Length = 133

 Score =  131 bits (330), Expect = 7e-29
 Identities = 66/127 (51%), Positives = 88/127 (69%), Gaps = 2/127 (1%)
 Frame = +1

Query: 73  FYGSLKRYWRRRQYQRIDGAIT--KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 246
           F GS KRYWRR++YQR+DGAIT  KN    R GG  +RTWKIK  PKL+    I SP KL
Sbjct: 8   FNGSWKRYWRRKRYQRLDGAITARKNTNVARFGGSPRRTWKIKAVPKLRILKNIASPTKL 67

Query: 247 MAKLRDAYINMMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKAL 426
           + KL++AYI+M+L +AGN     G + FG KR+PR R++     ++ FE +L++EIYK L
Sbjct: 68  LRKLKNAYISMILSVAGNA---DGTHVFGDKRVPRGRQVKAAYPSEAFEKRLVYEIYKNL 124

Query: 427 KASRELA 447
            A+REL+
Sbjct: 125 LATRELS 131


>ref|XP_002315915.1| predicted protein [Populus trichocarpa] gi|222864955|gb|EEF02086.1|
           predicted protein [Populus trichocarpa]
          Length = 130

 Score =  120 bits (301), Expect = 2e-25
 Identities = 61/124 (49%), Positives = 87/124 (70%)
 Frame = +1

Query: 76  YGSLKRYWRRRQYQRIDGAITKNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKLMAK 255
           Y ++KRYWRR +YQR++GA  +  K  RLG  R+  WK++  PKL   ++I SPIKL+AK
Sbjct: 9   YENVKRYWRRNRYQRLNGASKRKLKIARLGSGRR--WKLRAVPKLH--MEIASPIKLLAK 64

Query: 256 LRDAYINMMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKALKAS 435
             DAYI+MML LA N+GSL+   FF GK++ + + IS VS  D  +++L+ EIYK L AS
Sbjct: 65  FHDAYIDMMLRLATNIGSLNNKGFFRGKKVAKDQHISMVSSGDEVDSRLLLEIYKKLAAS 124

Query: 436 RELA 447
           R+++
Sbjct: 125 RDMS 128


>ref|NP_001237237.1| uncharacterized protein LOC100306593 [Glycine max]
           gi|255629003|gb|ACU14846.1| unknown [Glycine max]
          Length = 135

 Score =  115 bits (288), Expect = 5e-24
 Identities = 61/126 (48%), Positives = 86/126 (68%), Gaps = 3/126 (2%)
 Frame = +1

Query: 76  YGSLKRYWRRRQYQRIDGAIT---KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 246
           YG +K Y RRR+Y+R+ G  T   +    IRL G R R W+I+  P+L+W ++  SP+ +
Sbjct: 10  YGGIKSYLRRRRYRRLHGGATVVRRKMAIIRLRGPR-RYWRIRAVPRLRWVMR--SPLTI 66

Query: 247 MAKLRDAYINMMLGLAGNVGSLSGDNFFGGKRIPRARKISKVSKTDVFETKLIFEIYKAL 426
           + KL++AY+N ML L+GNVG+++ DN F  KRIP+AR++SK    D FE +LIFEI K L
Sbjct: 67  LTKLKNAYMNFMLKLSGNVGAMNSDNIFEVKRIPKARQVSKGYSRDEFEARLIFEISKTL 126

Query: 427 KASREL 444
            AS EL
Sbjct: 127 VASYEL 132


>gb|AFK45841.1| unknown [Lotus japonicus]
          Length = 139

 Score =  114 bits (284), Expect = 1e-23
 Identities = 60/127 (47%), Positives = 83/127 (65%), Gaps = 4/127 (3%)
 Frame = +1

Query: 76  YGSLKRYWRRRQYQRIDGAIT---KNPKAIRLGGKRKRTWKIKLTPKLKWGLKIVSPIKL 246
           YG +K+YWRRR YQ ++       K    IRL G  ++ W+I+  PKL+W ++  S +K 
Sbjct: 12  YGGMKKYWRRRHYQHLNRDAPTGRKKMNIIRLKGNPRKFWRIRAIPKLRWVMR--SLLKT 69

Query: 247 MAKLRDAYINMMLGLAGNVGSLSGDNFFGG-KRIPRARKISKVSKTDVFETKLIFEIYKA 423
           +AK+++ Y+N ML LAG VG+L  D+F G  KRIP+AR++SKV   D FE + IFEI K 
Sbjct: 70  VAKVKNGYMNFMLRLAGKVGALKTDSFLGSVKRIPKARQVSKVYSGDAFEARFIFEISKT 129

Query: 424 LKASREL 444
           L AS EL
Sbjct: 130 LVASNEL 136


Top