BLASTX nr result

ID: Coptis24_contig00033481 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033481
         (500 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI32004.3| unnamed protein product [Vitis vinifera]              142   2e-32
ref|XP_003532052.1| PREDICTED: probable LRR receptor-like serine...   138   5e-31
ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|2...   137   7e-31
emb|CCM07275.1| Putative receptor protein kinase TMK1 [Musa balb...   127   1e-27
ref|XP_003613606.1| LRR receptor-like serine/threonine-protein k...   122   4e-26

>emb|CBI32004.3| unnamed protein product [Vitis vinifera]
          Length = 720

 Score =  142 bits (359), Expect = 2e-32
 Identities = 76/169 (44%), Positives = 107/169 (63%), Gaps = 3/169 (1%)
 Frame = -2

Query: 499 LLSICGGTVATVGIIGLLLVMVFRKAKKNEIYAI---DKSVGRKSSAQLSPKLPTEARHV 329
           +L +  G V  + ++GLL + +FRK++ N+         SV  KS    S K  +EARHV
Sbjct: 339 ILGVVAGIVGVLVVLGLLTLAIFRKSRPNKSETDIFNQGSVAYKSPLHSSSKPISEARHV 398

Query: 328 SPTMRLLGAFGLRTYNVFTVDEIQEATSNFNPSNLIGEGPQGQLYKGCTRGGSTVVVRCM 149
             TM   G  GL  Y+VFT++E+++AT+NF+PSNLI EG QGQ YKG  R GS V+V+C+
Sbjct: 399 PTTMGF-GTLGLPPYHVFTLEEMEDATNNFDPSNLIAEGSQGQSYKGWLRDGSEVLVKCL 457

Query: 148 KXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVIHQDYSNETNTMFL 2
           K             ME ++KLRH+HLVS+LGHCIV +Q++ N  +T+FL
Sbjct: 458 KLKHKHSPQSLPQQMEAVTKLRHQHLVSVLGHCIVTYQEHPNTASTVFL 506


>ref|XP_003532052.1| PREDICTED: probable LRR receptor-like serine/threonine-protein
           kinase At1g14390-like [Glycine max]
          Length = 570

 Score =  138 bits (347), Expect = 5e-31
 Identities = 73/167 (43%), Positives = 105/167 (62%), Gaps = 1/167 (0%)
 Frame = -2

Query: 499 LLSICGGTVATVGIIGLLLVMVFRKAK-KNEIYAIDKSVGRKSSAQLSPKLPTEARHVSP 323
           +L I  G V   G++ LL+V + RK+K +   + +DKSV  K S  +SP+ P   RH+  
Sbjct: 198 MLGIIVGIVVIGGLLVLLVVCIIRKSKAERSPHKMDKSVANKYSTSVSPR-PIGTRHIPQ 256

Query: 322 TMRLLGAFGLRTYNVFTVDEIQEATSNFNPSNLIGEGPQGQLYKGCTRGGSTVVVRCMKX 143
            M+   A GL  Y +FT +EI++AT+NF+PSNLI EG QGQLYKG  R GS V+V C+K 
Sbjct: 257 AMKQ-AAVGLPPYRIFTSEEIEDATNNFDPSNLIEEGSQGQLYKGWLRDGSVVLVNCVKI 315

Query: 142 XXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVIHQDYSNETNTMFL 2
                       +EV+  LRHRH+VS+LGHC++  Q++   T+T+F+
Sbjct: 316 KQKGLPHSIMQQVEVLHNLRHRHMVSVLGHCVITEQEHPQTTSTVFI 362


>ref|XP_002326495.1| predicted protein [Populus trichocarpa] gi|222833817|gb|EEE72294.1|
           predicted protein [Populus trichocarpa]
          Length = 745

 Score =  137 bits (346), Expect = 7e-31
 Identities = 76/173 (43%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
 Frame = -2

Query: 499 LLSICGGTVATVGIIGLLLVMVFRKAKK----NEIYAI-DKSVGRKSS--AQLSPKLPTE 341
           +L I GG +   G++GLL+ ++ R++K     + +Y+I D SV  K S  ++ S +   +
Sbjct: 358 VLGIVGGVLGIAGVLGLLIFVIIRRSKTVAADDHVYSIFDGSVTSKRSVASKKSVRRAVD 417

Query: 340 ARHVSPTMRLLGAFGLRTYNVFTVDEIQEATSNFNPSNLIGEGPQGQLYKGCTRGGSTVV 161
           +R V  TMR   A GL  Y VFT++E+++AT+NF+P N IGEG QGQLYKGC   GS V+
Sbjct: 418 SRRVPQTMRS-AAIGLPPYRVFTLEEMEDATNNFDPLNFIGEGSQGQLYKGCLIDGSVVL 476

Query: 160 VRCMKXXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVIHQDYSNETNTMFL 2
           V+C+K             +EV+SKLRH HLVS+LGH IV +QD+S+   T+F+
Sbjct: 477 VKCVKLKQKNLPQSMIQQIEVLSKLRHLHLVSILGHTIVTYQDHSSTAGTVFV 529


>emb|CCM07275.1| Putative receptor protein kinase TMK1 [Musa balbisiana]
          Length = 770

 Score =  127 bits (318), Expect = 1e-27
 Identities = 72/168 (42%), Positives = 101/168 (60%), Gaps = 2/168 (1%)
 Frame = -2

Query: 499 LLSICGGTVATVGIIGLLLVMVFRKAKKNEIYAID--KSVGRKSSAQLSPKLPTEARHVS 326
           +L I GG V    ++GLL+ +VFR ++  E  AI   K    KS  Q + K P +ARH+S
Sbjct: 355 ILGIAGGVVVGAALLGLLVFLVFRSSRTVESKAIVLYKPEAAKSLPQDTTKTPADARHMS 414

Query: 325 PTMRLLGAFGLRTYNVFTVDEIQEATSNFNPSNLIGEGPQGQLYKGCTRGGSTVVVRCMK 146
             +R+ G  GL  Y VF+++E+Q+AT++FNPSNLI +  +GQ YKG  + GS V VR +K
Sbjct: 415 EAVRI-GTLGLIPYRVFSMEELQQATNSFNPSNLIEDSARGQFYKGWLQDGSMVTVRRLK 473

Query: 145 XXXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVIHQDYSNETNTMFL 2
                       ++++ISKLRH HL S+LGHC    QD  N T  +FL
Sbjct: 474 LNPRFLPQNLPHYLDLISKLRHHHLASILGHCNDSSQDGVNITTIVFL 521


>ref|XP_003613606.1| LRR receptor-like serine/threonine-protein kinase EFR [Medicago
           truncatula] gi|355514941|gb|AES96564.1| LRR
           receptor-like serine/threonine-protein kinase EFR
           [Medicago truncatula]
          Length = 683

 Score =  122 bits (305), Expect = 4e-26
 Identities = 68/167 (40%), Positives = 102/167 (61%), Gaps = 1/167 (0%)
 Frame = -2

Query: 499 LLSICGGTVATVGIIGLLLVMVFRKAK-KNEIYAIDKSVGRKSSAQLSPKLPTEARHVSP 323
           L  I GG V  VG++ LL + + RK+K + E  ++D  + R+S      +L   AR   P
Sbjct: 314 LFGIIGGFVGIVGLLILLFLFILRKSKAEREDRSVD--ISRES------RLNIYARSNVP 365

Query: 322 TMRLLGAFGLRTYNVFTVDEIQEATSNFNPSNLIGEGPQGQLYKGCTRGGSTVVVRCMKX 143
            +  L   GL  YN+FT++EI +AT+NF+PSNLIGEG QG+L+KG  + GS V+V  +K 
Sbjct: 366 QLMRLTTLGLPPYNIFTIEEIGDATNNFDPSNLIGEGSQGELFKGWLKDGSMVMVNLVKV 425

Query: 142 XXXXXXXXXXXHMEVISKLRHRHLVSLLGHCIVIHQDYSNETNTMFL 2
                      +++V+  LRHRHLVS+LGHC + ++D    T+T+F+
Sbjct: 426 KQKSLIKVSDQNLKVLPYLRHRHLVSVLGHCAITYEDQPKMTSTIFI 472


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