BLASTX nr result
ID: Coptis24_contig00033478
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Coptis24_contig00033478
(496 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi... 242 3e-62
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,... 206 1e-51
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2... 204 8e-51
ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containi... 201 5e-50
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi... 191 4e-47
>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Vitis vinifera]
Length = 580
Score = 242 bits (617), Expect = 3e-62
Identities = 111/164 (67%), Positives = 139/164 (84%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
DV +AN FL MLE+L++P+PLIWN+VIDG+G+ G L +A IRDQMV+ G+ PN FTYN
Sbjct: 394 DVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYN 453
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
ALIHAQ+KGG+IVDA+S+++EML N + PDVV+YNLLIGAACNFG + FA +LYDEMLRR
Sbjct: 454 ALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRR 513
Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
GYEPD+ITYTELIR C+RG++MEA ELL K+QRSG +DH P+
Sbjct: 514 GYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPF 557
Score = 86.7 bits (213), Expect = 2e-15
Identities = 62/202 (30%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
D+ KA+ + MLE P+ +N I GY ++D A Y+ M +G+ PN TYN
Sbjct: 181 DLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYN 240
Query: 183 ALIHAQVKGGSIVDAYSLQR--------------------------------------EM 248
LIHA K G + DA L EM
Sbjct: 241 ILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEM 300
Query: 249 LRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNI 428
L+ DVV+YN+LI C + A + + EM +RG PD+ TY LI C GN+
Sbjct: 301 LQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNL 360
Query: 429 MEATELLGKIQRSGAGVDHVPY 494
EA + G + + GA D + Y
Sbjct: 361 DEACYIHGVMSKMGAAPDLISY 382
Score = 72.0 bits (175), Expect = 5e-11
Identities = 41/124 (33%), Positives = 63/124 (50%)
Frame = +3
Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
G L A ++R++M+ GV P+ T+N L++ K G + A +L REML P+ ++
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204
Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQR 464
N I C +V A L+ M G P+ +TY LI C +G + +A +LL KI
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264
Query: 465 SGAG 476
G
Sbjct: 265 DDCG 268
Score = 71.6 bits (174), Expect = 6e-11
Identities = 40/130 (30%), Positives = 65/130 (50%)
Frame = +3
Query: 60 DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQ 239
D + + +DG K G + A D+M+ G + YN LIH + AY
Sbjct: 273 DIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYF 332
Query: 240 REMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMR 419
EM + LLPD+ +YN LI C G++ A ++ M + G PD+I+Y +I+ C+
Sbjct: 333 CEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIH 392
Query: 420 GNIMEATELL 449
G+++ A + L
Sbjct: 393 GDVIRANQFL 402
Score = 64.3 bits (155), Expect = 1e-08
Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
Frame = +3
Query: 12 KANMFLFN-MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNAL 188
+A ++L N M++ +IPD L N +++G K G L+ A + +M+ G +PN T+N
Sbjct: 148 RAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTF 207
Query: 189 IHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR-- 362
I ++ A L M + + P+ V+YN+LI A C G ++ A +L +++L
Sbjct: 208 IKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDC 267
Query: 363 GYE-PDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
G E D+IT T + +G++++A ++ + G +D V Y
Sbjct: 268 GKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAY 312
Score = 60.5 bits (145), Expect = 1e-07
Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
Frame = +3
Query: 60 DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQ 239
D + +N++I G+ ++ A+ +M G+ P+ FTYN LI K G++ +A +
Sbjct: 308 DVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIH 367
Query: 240 REMLRNELLPDVVSYNLLIGAACNFGHVRFATQ--------------------------- 338
M + PD++SY ++I C G V A Q
Sbjct: 368 GVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRH 427
Query: 339 --------LYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
+ D+M+ G P+V TY LI GNI++A + ++ +G D V Y
Sbjct: 428 GDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTY 487
Score = 59.7 bits (143), Expect = 2e-07
Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
Frame = +3
Query: 60 DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN-------ALIHAQVKGGSI 218
DP + V+D K SL+ +R+ + + N T A+I G +
Sbjct: 89 DPRVVFNVLDAILK-DSLERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKL 147
Query: 219 VDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTEL 398
A L+ +M++ ++PDV+++N L+ C G + A L EML G P+ T+
Sbjct: 148 RAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTF 207
Query: 399 IRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
I+ +C+ N+ +A L + SG G + V Y
Sbjct: 208 IKGYCLNNNVDKALYLFSTMANSGIGPNKVTY 239
>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 621
Score = 206 bits (525), Expect = 1e-51
Identities = 101/164 (61%), Positives = 124/164 (75%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
DV KAN L MLE ++P+ +WNL+IDG+ + G +AF IRDQM++ GV PN FTYN
Sbjct: 387 DVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYN 446
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
ALIHAQVK G+IVDAYSL++ ML + L PDV++YNLLIG ACN G + A QLY EMLR
Sbjct: 447 ALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRS 506
Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
G+EPD+ITYTELIR CMRGN+ EA EL K+Q +G VDHVP+
Sbjct: 507 GHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPF 550
Score = 82.0 bits (201), Expect = 5e-14
Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
D+ KA+ + MLE P+ +N I GY ++D A Y+ M +GV PN T N
Sbjct: 175 DLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLN 234
Query: 183 ALIHAQVKGGSIVDAYSLQREML------------------------------------- 251
L+HA K G + DA L E+L
Sbjct: 235 ILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMS 294
Query: 252 RNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
+N L D V+YN+LI C +++ A +ML+RG PD+ TY LI C G +
Sbjct: 295 QNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLY 354
Query: 432 EATELLGKIQRSGAGVDHVPY 494
EA + + R G D + Y
Sbjct: 355 EACYIHDVMLRMGVAPDQISY 375
Score = 79.7 bits (195), Expect = 2e-13
Identities = 50/154 (32%), Positives = 73/154 (47%)
Frame = +3
Query: 33 NMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGG 212
+ML+ L+PD +N +I G K G L A YI D M+ GVAP+ +Y +I G
Sbjct: 327 DMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRG 386
Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
++ A ML ++P+ +NL+I G A + D+ML G P+V TY
Sbjct: 387 DVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYN 446
Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
LI GNI++A L + G D + Y
Sbjct: 447 ALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITY 480
Score = 75.1 bits (183), Expect = 6e-12
Identities = 44/124 (35%), Positives = 66/124 (53%)
Frame = +3
Query: 78 LVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRN 257
+++DG K G + A I M ++ YN LIH ++ AYS +ML+
Sbjct: 272 ILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKR 331
Query: 258 ELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEA 437
LLPD+ +YN LI C G + A ++D MLR G PD I+Y +I+ C RG++++A
Sbjct: 332 GLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKA 391
Query: 438 TELL 449
E L
Sbjct: 392 NEHL 395
Score = 61.6 bits (148), Expect = 6e-08
Identities = 34/118 (28%), Positives = 59/118 (50%)
Frame = +3
Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
G L A ++R +++ G P+ T+N L++ G + A L +EML P+ ++
Sbjct: 139 GKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATF 198
Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKI 458
N I C +V A L+ M G +P+ +T L+ C RG + +A +LLG++
Sbjct: 199 NTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGEL 256
Score = 58.9 bits (141), Expect = 4e-07
Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Frame = +3
Query: 60 DPLIWNLVIDGYGKFGSLDHAFYIRDQM----VAAGVAPNTFTYNALIHAQVK-----GG 212
DP + V+D K GSL+ +R+ + V G+A + + HA + G
Sbjct: 81 DPQVVFNVLDAMLK-GSLERLKSMRESIGISSVKVGLAGRSVDVSYAGHASLVRDLCLAG 139
Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
+ A L+R++L +PD++++N L+ CN G ++ A L EML G P+ T+
Sbjct: 140 KLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFN 199
Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHV 488
I+ +C+ N+ +A L + SG + V
Sbjct: 200 TFIKGYCLLNNVDKALYLFSSMSDSGVKPNRV 231
>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
predicted protein [Populus trichocarpa]
Length = 521
Score = 204 bits (518), Expect = 8e-51
Identities = 99/164 (60%), Positives = 128/164 (78%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
DV+KAN +L LE +IP+PL+WNL+IDGYG+ G + +AF IRD+M++ GV PN FTYN
Sbjct: 313 DVDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDICNAFAIRDRMLSFGVVPNVFTYN 372
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
ALIHAQVK G+I+ AY L+++ML L PDVV+YNLLIGAA + GH+ +A QLYDEMLR
Sbjct: 373 ALIHAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRG 432
Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
G PD+ITYTELIR +C++ N EA ELL K+ +SG +DHVP+
Sbjct: 433 GCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPF 476
Score = 63.2 bits (152), Expect = 2e-08
Identities = 36/122 (29%), Positives = 58/122 (47%)
Frame = +3
Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
G L A ++R +M+ G P+ T+N +++ K + A L REML P+ +Y
Sbjct: 78 GKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATY 137
Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQR 464
N I C V A L+ M G +P+ +T+ L+ C + + E +LLG+I
Sbjct: 138 NTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILD 197
Query: 465 SG 470
G
Sbjct: 198 DG 199
Score = 60.1 bits (144), Expect = 2e-07
Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
Frame = +3
Query: 60 DPLIWNLVIDGYGKFGSLDHAFYIRDQMVA---------AGVAPNTFTYNALIHAQVKGG 212
DPL++N V+D K GSLD +R Q V+ + N A+I GG
Sbjct: 21 DPLVFN-VLDSMLK-GSLDRLKSMRLQFVSFLYGKGITGCALDVNCAGNEAIIKDLCLGG 78
Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
+ A L+ +M++ +PDV+++N ++ C + A L EML +G P+ TY
Sbjct: 79 KLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATYN 138
Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
I+ +C+ + +A L + SG + V +
Sbjct: 139 TFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTF 172
>ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
gi|449499387|ref|XP_004160802.1| PREDICTED:
pentatricopeptide repeat-containing protein
At5g24830-like [Cucumis sativus]
Length = 633
Score = 201 bits (511), Expect = 5e-50
Identities = 99/164 (60%), Positives = 122/164 (74%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
D KA+ FL +MLE ++P+P IWNL+ID YG++G L +A RDQM+ AGV PN FTYN
Sbjct: 396 DAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYN 455
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
ALIHAQV+GG+I AYSL++EML L PDVV+YNLLI AC G +RFA QLYDEMLR+
Sbjct: 456 ALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRK 515
Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
GYE D ITYTELI HCM G + EA +L ++ RSG +D VP+
Sbjct: 516 GYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPF 559
Score = 82.0 bits (201), Expect = 5e-14
Identities = 48/157 (30%), Positives = 74/157 (47%)
Frame = +3
Query: 24 FLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQV 203
++ +ML+ +PD +N +I + K G A+YI D M GV+P+ Y +I A
Sbjct: 333 YVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKMIIQALC 392
Query: 204 KGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVI 383
G + A ML ++P+ +NL+I +G++ A D+ML G +P+V
Sbjct: 393 MNGDAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVF 452
Query: 384 TYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
TY LI GNI A L ++ G D V Y
Sbjct: 453 TYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTY 489
Score = 74.7 bits (182), Expect = 7e-12
Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
D+ A+ MLE P+ +N++I G+ ++D A + MV +G+ P+ TYN
Sbjct: 184 DMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYN 243
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLP------------------------------- 269
L+HA K G +VDA L +L +++
Sbjct: 244 ILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMV 303
Query: 270 ------DVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
DVV+YN+LI C + A +ML+RG+ PD+ TY LI C G
Sbjct: 304 EKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFG 363
Query: 432 EATELLGKIQRSGAGVDHVPY 494
+A + + R G D + Y
Sbjct: 364 DAYYIHDVMSRMGVSPDQILY 384
Score = 58.5 bits (140), Expect = 5e-07
Identities = 38/118 (32%), Positives = 61/118 (51%)
Frame = +3
Query: 96 GKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDV 275
GKFG+ A +R +++ G A + T+N L++ + A SL REML P+
Sbjct: 148 GKFGA---ALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDMEMADSLFREMLEMGPSPNC 204
Query: 276 VSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELL 449
+YN++I C ++ A L+ M+ G P ITY L+ C RG +++A +LL
Sbjct: 205 ATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILVDARKLL 262
>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
At5g24830-like [Glycine max]
Length = 577
Score = 191 bits (486), Expect = 4e-47
Identities = 93/163 (57%), Positives = 121/163 (74%)
Frame = +3
Query: 3 DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
++ +A L+ ML +L++P PLIWNL+ID YG++ L +AF+ RDQM++ GV PN FTYN
Sbjct: 382 EIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYN 441
Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
ALI AQVK G+ A SL+ EM+ L PDVV+YNLLIGAACN G + FA L+D+M++R
Sbjct: 442 ALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQR 501
Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVP 491
GYEPD+ITYTEL+R C+RG + EA EL KI +SG DHVP
Sbjct: 502 GYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVP 544
Score = 79.7 bits (195), Expect = 2e-13
Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
Frame = +3
Query: 6 VNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNA 185
++KA++ + MLE P+ +N +I GY +D A Y+ M AG+ PN T
Sbjct: 170 LDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRI 229
Query: 186 LIHA--------------------------------------QVKGGSIVDAYSLQREML 251
L+HA K G+I+ A +L +ML
Sbjct: 230 LVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQML 289
Query: 252 RNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
+N DVV+YN+LI C + A EM ++G PD TY +I C G I
Sbjct: 290 QNCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKIS 349
Query: 432 EATELLGKIQRSGAGVDHVPY 494
EA +G + G D + Y
Sbjct: 350 EACYTVGVMSNMGIMPDQITY 370
Score = 79.0 bits (193), Expect = 4e-13
Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
Frame = +3
Query: 36 MLEDLL-------IPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIH 194
MLE++L IPD +I + +D Y K G++ A + +QM+ + YN LI+
Sbjct: 246 MLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLIN 305
Query: 195 AQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEP 374
K + AY EM + LLPD +YN++IGA C G + A M G P
Sbjct: 306 GFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMP 365
Query: 375 DVITYTELIRVHCMRGNIMEATELL 449
D ITY +IR C G I+ A LL
Sbjct: 366 DQITYQIVIRGLCFAGEIVRAKHLL 390
Score = 58.9 bits (141), Expect = 4e-07
Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
Frame = +3
Query: 36 MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGS 215
M + ++ D N +++G K G LD A + +M+ G PN TYN LI
Sbjct: 145 MAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNG 204
Query: 216 IVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYE---PDVIT 386
+ A L M +LP+ V+ +L+ A C G + A ++ +E+L+ E PD++
Sbjct: 205 VDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVI 264
Query: 387 YTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
T + + G I++A L ++ ++ VD V Y
Sbjct: 265 STVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAY 300
Score = 57.8 bits (138), Expect = 9e-07
Identities = 36/118 (30%), Positives = 57/118 (48%)
Frame = +3
Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
G L A ++ +M GV + FT+N +++ K G + A + REML P+ +Y
Sbjct: 133 GKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCATY 192
Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKI 458
N LI C V A L+ M G P+ +T L+ C +G +MEA +L ++
Sbjct: 193 NTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEV 250
Score = 57.0 bits (136), Expect = 2e-06
Identities = 33/107 (30%), Positives = 48/107 (44%)
Frame = +3
Query: 36 MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGS 215
M+ L PD + +NL+I G LD A + DQMV G P+ TY L+ G
Sbjct: 463 MISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIRGK 522
Query: 216 IVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEML 356
+ +A L ++L++ LL D V +L C A Y + L
Sbjct: 523 MKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQDWL 569