BLASTX nr result

ID: Coptis24_contig00033478 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033478
         (496 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containi...   242   3e-62
ref|XP_002527978.1| pentatricopeptide repeat-containing protein,...   206   1e-51
ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|2...   204   8e-51
ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containi...   201   5e-50
ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containi...   191   4e-47

>ref|XP_003635109.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Vitis vinifera]
          Length = 580

 Score =  242 bits (617), Expect = 3e-62
 Identities = 111/164 (67%), Positives = 139/164 (84%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           DV +AN FL  MLE+L++P+PLIWN+VIDG+G+ G L +A  IRDQMV+ G+ PN FTYN
Sbjct: 394 DVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRHGDLSNALSIRDQMVSFGIPPNVFTYN 453

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
           ALIHAQ+KGG+IVDA+S+++EML N + PDVV+YNLLIGAACNFG + FA +LYDEMLRR
Sbjct: 454 ALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTYNLLIGAACNFGRIHFALRLYDEMLRR 513

Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           GYEPD+ITYTELIR  C+RG++MEA ELL K+QRSG  +DH P+
Sbjct: 514 GYEPDIITYTELIRGFCIRGHVMEAEELLAKLQRSGLSIDHAPF 557



 Score = 86.7 bits (213), Expect = 2e-15
 Identities = 62/202 (30%), Positives = 86/202 (42%), Gaps = 38/202 (18%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           D+ KA+  +  MLE    P+   +N  I GY    ++D A Y+   M  +G+ PN  TYN
Sbjct: 181 DLEKADNLVREMLEIGPSPNCATFNTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYN 240

Query: 183 ALIHAQVKGGSIVDAYSLQR--------------------------------------EM 248
            LIHA  K G + DA  L                                        EM
Sbjct: 241 ILIHALCKKGLLKDARKLLEKILDDDCGKETSDIITSTIFMDGCLKKGDMVQALVHWDEM 300

Query: 249 LRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNI 428
           L+     DVV+YN+LI   C    +  A + + EM +RG  PD+ TY  LI   C  GN+
Sbjct: 301 LQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNL 360

Query: 429 MEATELLGKIQRSGAGVDHVPY 494
            EA  + G + + GA  D + Y
Sbjct: 361 DEACYIHGVMSKMGAAPDLISY 382



 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 41/124 (33%), Positives = 63/124 (50%)
 Frame = +3

Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
           G L  A ++R++M+  GV P+  T+N L++   K G +  A +L REML     P+  ++
Sbjct: 145 GKLRAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATF 204

Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQR 464
           N  I   C   +V  A  L+  M   G  P+ +TY  LI   C +G + +A +LL KI  
Sbjct: 205 NTFIKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILD 264

Query: 465 SGAG 476
              G
Sbjct: 265 DDCG 268



 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 40/130 (30%), Positives = 65/130 (50%)
 Frame = +3

Query: 60  DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQ 239
           D +   + +DG  K G +  A    D+M+  G   +   YN LIH       +  AY   
Sbjct: 273 DIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAYNVLIHGFCLIQDMNSAYRYF 332

Query: 240 REMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMR 419
            EM +  LLPD+ +YN LI   C  G++  A  ++  M + G  PD+I+Y  +I+  C+ 
Sbjct: 333 CEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIHGVMSKMGAAPDLISYKMIIQGLCIH 392

Query: 420 GNIMEATELL 449
           G+++ A + L
Sbjct: 393 GDVIRANQFL 402



 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 48/165 (29%), Positives = 87/165 (52%), Gaps = 4/165 (2%)
 Frame = +3

Query: 12  KANMFLFN-MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNAL 188
           +A ++L N M++  +IPD L  N +++G  K G L+ A  +  +M+  G +PN  T+N  
Sbjct: 148 RAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTF 207

Query: 189 IHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR-- 362
           I       ++  A  L   M  + + P+ V+YN+LI A C  G ++ A +L +++L    
Sbjct: 208 IKGYCLNNNVDKALYLFSTMANSGIGPNKVTYNILIHALCKKGLLKDARKLLEKILDDDC 267

Query: 363 GYE-PDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           G E  D+IT T  +     +G++++A     ++ + G  +D V Y
Sbjct: 268 GKETSDIITSTIFMDGCLKKGDMVQALVHWDEMLQRGTQIDVVAY 312



 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 45/180 (25%), Positives = 75/180 (41%), Gaps = 35/180 (19%)
 Frame = +3

Query: 60  DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQ 239
           D + +N++I G+     ++ A+    +M   G+ P+ FTYN LI    K G++ +A  + 
Sbjct: 308 DVVAYNVLIHGFCLIQDMNSAYRYFCEMFKRGLLPDIFTYNTLISGFCKIGNLDEACYIH 367

Query: 240 REMLRNELLPDVVSYNLLIGAACNFGHVRFATQ--------------------------- 338
             M +    PD++SY ++I   C  G V  A Q                           
Sbjct: 368 GVMSKMGAAPDLISYKMIIQGLCIHGDVIRANQFLVCMLENLMVPEPLIWNVVIDGHGRH 427

Query: 339 --------LYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
                   + D+M+  G  P+V TY  LI      GNI++A  +  ++  +G   D V Y
Sbjct: 428 GDLSNALSIRDQMVSFGIPPNVFTYNALIHAQIKGGNIVDAHSIKKEMLLNGIYPDVVTY 487



 Score = 59.7 bits (143), Expect = 2e-07
 Identities = 41/152 (26%), Positives = 70/152 (46%), Gaps = 7/152 (4%)
 Frame = +3

Query: 60  DPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN-------ALIHAQVKGGSI 218
           DP +   V+D   K  SL+    +R+ +    +  N  T         A+I      G +
Sbjct: 89  DPRVVFNVLDAILK-DSLERLKMMRESVSLTKIGLNGCTLEMDYTGCVAMIRNLCLEGKL 147

Query: 219 VDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTEL 398
             A  L+ +M++  ++PDV+++N L+   C  G +  A  L  EML  G  P+  T+   
Sbjct: 148 RAALWLRNKMIQKGVIPDVLTHNYLVNGLCKAGDLEKADNLVREMLEIGPSPNCATFNTF 207

Query: 399 IRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           I+ +C+  N+ +A  L   +  SG G + V Y
Sbjct: 208 IKGYCLNNNVDKALYLFSTMANSGIGPNKVTY 239


>ref|XP_002527978.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223532604|gb|EEF34390.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 621

 Score =  206 bits (525), Expect = 1e-51
 Identities = 101/164 (61%), Positives = 124/164 (75%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           DV KAN  L  MLE  ++P+  +WNL+IDG+ + G   +AF IRDQM++ GV PN FTYN
Sbjct: 387 DVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYN 446

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
           ALIHAQVK G+IVDAYSL++ ML + L PDV++YNLLIG ACN G +  A QLY EMLR 
Sbjct: 447 ALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITYNLLIGTACNAGRISIAVQLYYEMLRS 506

Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           G+EPD+ITYTELIR  CMRGN+ EA EL  K+Q +G  VDHVP+
Sbjct: 507 GHEPDIITYTELIRGLCMRGNMKEAKELFAKLQNTGLTVDHVPF 550



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 59/201 (29%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           D+ KA+  +  MLE    P+   +N  I GY    ++D A Y+   M  +GV PN  T N
Sbjct: 175 DLQKADCLIKEMLEIGPSPNCATFNTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLN 234

Query: 183 ALIHAQVKGGSIVDAYSLQREML------------------------------------- 251
            L+HA  K G + DA  L  E+L                                     
Sbjct: 235 ILVHALCKRGLLEDAKKLLGELLDDNEKARVNLITSTILMDGCIKNGDMVQALGIWYAMS 294

Query: 252 RNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
           +N  L D V+YN+LI   C   +++ A     +ML+RG  PD+ TY  LI   C  G + 
Sbjct: 295 QNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKRGLLPDIFTYNTLISGLCKAGKLY 354

Query: 432 EATELLGKIQRSGAGVDHVPY 494
           EA  +   + R G   D + Y
Sbjct: 355 EACYIHDVMLRMGVAPDQISY 375



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 50/154 (32%), Positives = 73/154 (47%)
 Frame = +3

Query: 33  NMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGG 212
           +ML+  L+PD   +N +I G  K G L  A YI D M+  GVAP+  +Y  +I      G
Sbjct: 327 DMLKRGLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRG 386

Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
            ++ A      ML   ++P+   +NL+I      G    A  + D+ML  G  P+V TY 
Sbjct: 387 DVLKANEHLHCMLEKSMVPEAHVWNLIIDGFARCGDSANAFSIRDQMLSFGVVPNVFTYN 446

Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
            LI      GNI++A  L   +   G   D + Y
Sbjct: 447 ALIHAQVKTGNIVDAYSLKKMMLCHGLFPDVITY 480



 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 44/124 (35%), Positives = 66/124 (53%)
 Frame = +3

Query: 78  LVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRN 257
           +++DG  K G +  A  I   M       ++  YN LIH      ++  AYS   +ML+ 
Sbjct: 272 ILMDGCIKNGDMVQALGIWYAMSQNNTLMDSVAYNVLIHGFCLTRNMKLAYSYSCDMLKR 331

Query: 258 ELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEA 437
            LLPD+ +YN LI   C  G +  A  ++D MLR G  PD I+Y  +I+  C RG++++A
Sbjct: 332 GLLPDIFTYNTLISGLCKAGKLYEACYIHDVMLRMGVAPDQISYKIVIQGLCTRGDVLKA 391

Query: 438 TELL 449
            E L
Sbjct: 392 NEHL 395



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/118 (28%), Positives = 59/118 (50%)
 Frame = +3

Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
           G L  A ++R +++  G  P+  T+N L++     G +  A  L +EML     P+  ++
Sbjct: 139 GKLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATF 198

Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKI 458
           N  I   C   +V  A  L+  M   G +P+ +T   L+   C RG + +A +LLG++
Sbjct: 199 NTFIKGYCLLNNVDKALYLFSSMSDSGVKPNRVTLNILVHALCKRGLLEDAKKLLGEL 256



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 42/152 (27%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
 Frame = +3

Query: 60  DPLIWNLVIDGYGKFGSLDHAFYIRDQM----VAAGVAPNTFTYNALIHAQVK-----GG 212
           DP +   V+D   K GSL+    +R+ +    V  G+A  +   +   HA +       G
Sbjct: 81  DPQVVFNVLDAMLK-GSLERLKSMRESIGISSVKVGLAGRSVDVSYAGHASLVRDLCLAG 139

Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
            +  A  L+R++L    +PD++++N L+   CN G ++ A  L  EML  G  P+  T+ 
Sbjct: 140 KLGAALWLRRKLLHKGFVPDILTHNFLVNGLCNSGDLQKADCLIKEMLEIGPSPNCATFN 199

Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHV 488
             I+ +C+  N+ +A  L   +  SG   + V
Sbjct: 200 TFIKGYCLLNNVDKALYLFSSMSDSGVKPNRV 231


>ref|XP_002332091.1| predicted protein [Populus trichocarpa] gi|222874911|gb|EEF12042.1|
           predicted protein [Populus trichocarpa]
          Length = 521

 Score =  204 bits (518), Expect = 8e-51
 Identities = 99/164 (60%), Positives = 128/164 (78%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           DV+KAN +L   LE  +IP+PL+WNL+IDGYG+ G + +AF IRD+M++ GV PN FTYN
Sbjct: 313 DVDKANGYLNCTLEKSMIPEPLVWNLIIDGYGRCGDICNAFAIRDRMLSFGVVPNVFTYN 372

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
           ALIHAQVK G+I+ AY L+++ML   L PDVV+YNLLIGAA + GH+ +A QLYDEMLR 
Sbjct: 373 ALIHAQVKIGNILYAYFLKKDMLLKGLFPDVVTYNLLIGAAAHAGHIHYALQLYDEMLRG 432

Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           G  PD+ITYTELIR +C++ N  EA ELL K+ +SG  +DHVP+
Sbjct: 433 GCNPDMITYTELIRGYCVKYNTKEAEELLAKLLKSGLLIDHVPF 476



 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 36/122 (29%), Positives = 58/122 (47%)
 Frame = +3

Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
           G L  A ++R +M+  G  P+  T+N +++   K   +  A  L REML     P+  +Y
Sbjct: 78  GKLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATY 137

Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKIQR 464
           N  I   C    V  A  L+  M   G +P+ +T+  L+   C +  + E  +LLG+I  
Sbjct: 138 NTFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTFNTLLHALCKKDLLTEGKKLLGEILD 197

Query: 465 SG 470
            G
Sbjct: 198 DG 199



 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 43/154 (27%), Positives = 72/154 (46%), Gaps = 9/154 (5%)
 Frame = +3

Query: 60  DPLIWNLVIDGYGKFGSLDHAFYIRDQMVA---------AGVAPNTFTYNALIHAQVKGG 212
           DPL++N V+D   K GSLD    +R Q V+           +  N     A+I     GG
Sbjct: 21  DPLVFN-VLDSMLK-GSLDRLKSMRLQFVSFLYGKGITGCALDVNCAGNEAIIKDLCLGG 78

Query: 213 SIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYT 392
            +  A  L+ +M++   +PDV+++N ++   C    +  A  L  EML +G  P+  TY 
Sbjct: 79  KLGPALWLRSKMIQKGFVPDVLTHNYMVNGLCKMIELEKADWLIREMLDKGPSPNCATYN 138

Query: 393 ELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
             I+ +C+   + +A  L   +  SG   + V +
Sbjct: 139 TFIKGYCLLDKVDKALHLFSSMANSGTKPNRVTF 172


>ref|XP_004138876.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
           gi|449499387|ref|XP_004160802.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g24830-like [Cucumis sativus]
          Length = 633

 Score =  201 bits (511), Expect = 5e-50
 Identities = 99/164 (60%), Positives = 122/164 (74%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           D  KA+ FL +MLE  ++P+P IWNL+ID YG++G L +A   RDQM+ AGV PN FTYN
Sbjct: 396 DAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVFTYN 455

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
           ALIHAQV+GG+I  AYSL++EML   L PDVV+YNLLI  AC  G +RFA QLYDEMLR+
Sbjct: 456 ALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTYNLLINGACKHGQLRFALQLYDEMLRK 515

Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           GYE D ITYTELI  HCM G + EA +L  ++ RSG  +D VP+
Sbjct: 516 GYEADKITYTELINGHCMCGEMKEAEDLFFELHRSGLPMDIVPF 559



 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 48/157 (30%), Positives = 74/157 (47%)
 Frame = +3

Query: 24  FLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQV 203
           ++ +ML+   +PD   +N +I  + K G    A+YI D M   GV+P+   Y  +I A  
Sbjct: 333 YVADMLKRGFLPDIFTYNTLISAFCKEGQFGDAYYIHDVMSRMGVSPDQILYKMIIQALC 392

Query: 204 KGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVI 383
             G  + A      ML   ++P+   +NL+I     +G++  A    D+ML  G +P+V 
Sbjct: 393 MNGDAIKADEFLHSMLEKSMVPEPHIWNLIIDCYGRYGYLSNAISKRDQMLVAGVQPNVF 452

Query: 384 TYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
           TY  LI      GNI  A  L  ++   G   D V Y
Sbjct: 453 TYNALIHAQVRGGNIFSAYSLKKEMLLLGLFPDVVTY 489



 Score = 74.7 bits (182), Expect = 7e-12
 Identities = 54/201 (26%), Positives = 84/201 (41%), Gaps = 37/201 (18%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           D+  A+     MLE    P+   +N++I G+    ++D A  +   MV +G+ P+  TYN
Sbjct: 184 DMEMADSLFREMLEMGPSPNCATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYN 243

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLP------------------------------- 269
            L+HA  K G +VDA  L   +L +++                                 
Sbjct: 244 ILLHALCKRGILVDARKLLEVILGDDIKTTDDAITSTILMDSCFKSGDTIQAVALWDKMV 303

Query: 270 ------DVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
                 DVV+YN+LI   C     + A     +ML+RG+ PD+ TY  LI   C  G   
Sbjct: 304 EKKTEIDVVAYNVLIHGLCLNQDKKIALGYVADMLKRGFLPDIFTYNTLISAFCKEGQFG 363

Query: 432 EATELLGKIQRSGAGVDHVPY 494
           +A  +   + R G   D + Y
Sbjct: 364 DAYYIHDVMSRMGVSPDQILY 384



 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 38/118 (32%), Positives = 61/118 (51%)
 Frame = +3

Query: 96  GKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDV 275
           GKFG+   A  +R +++  G A +  T+N L++       +  A SL REML     P+ 
Sbjct: 148 GKFGA---ALLLRRKLIKEGFAVDLVTHNYLLNGLCINCDMEMADSLFREMLEMGPSPNC 204

Query: 276 VSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELL 449
            +YN++I   C   ++  A  L+  M+  G  P  ITY  L+   C RG +++A +LL
Sbjct: 205 ATYNIIIKGFCLRMNMDKALDLFYTMVNSGIRPSRITYNILLHALCKRGILVDARKLL 262


>ref|XP_003541593.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g24830-like [Glycine max]
          Length = 577

 Score =  191 bits (486), Expect = 4e-47
 Identities = 93/163 (57%), Positives = 121/163 (74%)
 Frame = +3

Query: 3   DVNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYN 182
           ++ +A   L+ ML +L++P PLIWNL+ID YG++  L +AF+ RDQM++ GV PN FTYN
Sbjct: 382 EIVRAKHLLWCMLNNLMVPKPLIWNLIIDLYGRYNDLSNAFFTRDQMLSFGVCPNVFTYN 441

Query: 183 ALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRR 362
           ALI AQVK G+   A SL+ EM+   L PDVV+YNLLIGAACN G + FA  L+D+M++R
Sbjct: 442 ALILAQVKSGNFHGACSLKEEMISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQR 501

Query: 363 GYEPDVITYTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVP 491
           GYEPD+ITYTEL+R  C+RG + EA EL  KI +SG   DHVP
Sbjct: 502 GYEPDLITYTELVRGFCIRGKMKEAEELYAKILKSGLLNDHVP 544



 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 56/201 (27%), Positives = 82/201 (40%), Gaps = 38/201 (18%)
 Frame = +3

Query: 6   VNKANMFLFNMLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNA 185
           ++KA++ +  MLE    P+   +N +I GY     +D A Y+   M  AG+ PN  T   
Sbjct: 170 LDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRI 229

Query: 186 LIHA--------------------------------------QVKGGSIVDAYSLQREML 251
           L+HA                                        K G+I+ A +L  +ML
Sbjct: 230 LVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQML 289

Query: 252 RNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIM 431
           +N    DVV+YN+LI   C    +  A     EM ++G  PD  TY  +I   C  G I 
Sbjct: 290 QNCTKVDVVAYNVLINGFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKIS 349

Query: 432 EATELLGKIQRSGAGVDHVPY 494
           EA   +G +   G   D + Y
Sbjct: 350 EACYTVGVMSNMGIMPDQITY 370



 Score = 79.0 bits (193), Expect = 4e-13
 Identities = 51/145 (35%), Positives = 71/145 (48%), Gaps = 7/145 (4%)
 Frame = +3

Query: 36  MLEDLL-------IPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIH 194
           MLE++L       IPD +I  + +D Y K G++  A  + +QM+      +   YN LI+
Sbjct: 246 MLEEVLKDDDEKDIPDLVISTVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAYNVLIN 305

Query: 195 AQVKGGSIVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYEP 374
              K   +  AY    EM +  LLPD  +YN++IGA C  G +  A      M   G  P
Sbjct: 306 GFCKSQQMNLAYGYACEMFKKGLLPDAFTYNIIIGALCKEGKISEACYTVGVMSNMGIMP 365

Query: 375 DVITYTELIRVHCMRGNIMEATELL 449
           D ITY  +IR  C  G I+ A  LL
Sbjct: 366 DQITYQIVIRGLCFAGEIVRAKHLL 390



 Score = 58.9 bits (141), Expect = 4e-07
 Identities = 43/156 (27%), Positives = 74/156 (47%), Gaps = 3/156 (1%)
 Frame = +3

Query: 36  MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGS 215
           M +  ++ D    N +++G  K G LD A  +  +M+  G  PN  TYN LI        
Sbjct: 145 MAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCATYNTLIKGYCAVNG 204

Query: 216 IVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEMLRRGYE---PDVIT 386
           +  A  L   M    +LP+ V+  +L+ A C  G +  A ++ +E+L+   E   PD++ 
Sbjct: 205 VDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEVLKDDDEKDIPDLVI 264

Query: 387 YTELIRVHCMRGNIMEATELLGKIQRSGAGVDHVPY 494
            T  +  +   G I++A  L  ++ ++   VD V Y
Sbjct: 265 STVFMDSYFKDGAIIQALNLWNQMLQNCTKVDVVAY 300



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 36/118 (30%), Positives = 57/118 (48%)
 Frame = +3

Query: 105 GSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGSIVDAYSLQREMLRNELLPDVVSY 284
           G L  A ++  +M   GV  + FT+N +++   K G +  A  + REML     P+  +Y
Sbjct: 133 GKLGAAVWLWGKMAQKGVVSDVFTHNHIVNGLCKIGLLDKADLVVREMLEFGPRPNCATY 192

Query: 285 NLLIGAACNFGHVRFATQLYDEMLRRGYEPDVITYTELIRVHCMRGNIMEATELLGKI 458
           N LI   C    V  A  L+  M   G  P+ +T   L+   C +G +MEA  +L ++
Sbjct: 193 NTLIKGYCAVNGVDRALYLFSTMTYAGILPNRVTCRILVHALCEKGLLMEAKRMLEEV 250



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 33/107 (30%), Positives = 48/107 (44%)
 Frame = +3

Query: 36  MLEDLLIPDPLIWNLVIDGYGKFGSLDHAFYIRDQMVAAGVAPNTFTYNALIHAQVKGGS 215
           M+   L PD + +NL+I      G LD A  + DQMV  G  P+  TY  L+      G 
Sbjct: 463 MISKCLFPDVVTYNLLIGAACNIGRLDFALLLHDQMVQRGYEPDLITYTELVRGFCIRGK 522

Query: 216 IVDAYSLQREMLRNELLPDVVSYNLLIGAACNFGHVRFATQLYDEML 356
           + +A  L  ++L++ LL D V   +L    C       A   Y + L
Sbjct: 523 MKEAEELYAKILKSGLLNDHVPVQILFNKYCKLKEPVIAFNFYQDWL 569


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