BLASTX nr result

ID: Coptis24_contig00033456 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033456
         (365 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_194634.1| concanavalin A-like lectin kinase-like protein ...   139   2e-31
ref|XP_002867426.1| hypothetical protein ARALYDRAFT_353897 [Arab...   137   7e-31
ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|2...   131   6e-29
gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]             130   8e-29
ref|XP_002534540.1| carbohydrate binding protein, putative [Rici...   130   8e-29

>ref|NP_194634.1| concanavalin A-like lectin kinase-like protein [Arabidopsis
           thaliana] gi|75337901|sp|Q9SZD5.1|LRK59_ARATH RecName:
           Full=L-type lectin-domain containing receptor kinase
           V.9; Short=LecRK-V.9; Flags: Precursor
           gi|4972051|emb|CAB43919.1| serine/threonine-specific
           kinase like protein [Arabidopsis thaliana]
           gi|7269803|emb|CAB79663.1| serine/threonine-specific
           kinase like protein [Arabidopsis thaliana]
           gi|332660179|gb|AEE85579.1| concanavalin A-like lectin
           kinase-like protein [Arabidopsis thaliana]
          Length = 669

 Score =  139 bits (350), Expect = 2e-31
 Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 4/125 (3%)
 Frame = -3

Query: 363 SAGGASVGTSSPVTLTNSESFKAGRVFYSFPLSFKNSTNASVNSFSTTFIFKIASR---- 196
           ++G A   +   + LTNS  F  G VFY+ P+ FKNS N +V+SFSTTF+F I S     
Sbjct: 37  NSGIAITNSKGLMKLTNSSEFSYGHVFYNSPVRFKNSPNGTVSSFSTTFVFAIVSNVNAL 96

Query: 195 NGQGIAFAVSPTKDFSTAIPSQYLGLFNSSNNGDPANHIVAIEFDVFKNVVFNDINDNHV 16
           +G G+AF +SPTK    +  SQYLGLFN +NNGDP+NHIVA+EFD F+N  F+D+++NHV
Sbjct: 97  DGHGLAFVISPTKGLPYSSSSQYLGLFNLTNNGDPSNHIVAVEFDTFQNQEFDDMDNNHV 156

Query: 15  GIDIN 1
           GIDIN
Sbjct: 157 GIDIN 161


>ref|XP_002867426.1| hypothetical protein ARALYDRAFT_353897 [Arabidopsis lyrata subsp.
           lyrata] gi|297313262|gb|EFH43685.1| hypothetical protein
           ARALYDRAFT_353897 [Arabidopsis lyrata subsp. lyrata]
          Length = 657

 Score =  137 bits (346), Expect = 7e-31
 Identities = 69/125 (55%), Positives = 91/125 (72%), Gaps = 4/125 (3%)
 Frame = -3

Query: 363 SAGGASVGTSSPVTLTNSESFKAGRVFYSFPLSFKNSTNASVNSFSTTFIFKIASR---- 196
           S G A++ ++  + L+N    K G+VFY+ P+ FKNS NA+V+SFSTTF+F I S+    
Sbjct: 38  SYGTANLDSNGLLKLSNYTVQKTGQVFYNLPVRFKNSPNATVSSFSTTFVFAIVSQIPTL 97

Query: 195 NGQGIAFAVSPTKDFSTAIPSQYLGLFNSSNNGDPANHIVAIEFDVFKNVVFNDINDNHV 16
           +G GIAFA+ PTK    A PSQYLGLFN SNNG+ +NH+VA+EFD  ++  F DI+DNHV
Sbjct: 98  SGHGIAFAICPTKGLPYATPSQYLGLFNISNNGNFSNHVVAVEFDTIQSTEFRDIDDNHV 157

Query: 15  GIDIN 1
           GIDIN
Sbjct: 158 GIDIN 162


>ref|XP_002303928.1| predicted protein [Populus trichocarpa] gi|222841360|gb|EEE78907.1|
           predicted protein [Populus trichocarpa]
          Length = 647

 Score =  131 bits (329), Expect = 6e-29
 Identities = 65/123 (52%), Positives = 85/123 (69%), Gaps = 4/123 (3%)
 Frame = -3

Query: 357 GGASVGTSSPVTLTNSESFKAGRVFYSFPLSFKNSTNASVNSFSTTFIFKIASRNGQ--- 187
           G A +       LTNS +F  GR F+S PLSFKNS+N +  SFSTTF+F      G+   
Sbjct: 22  GVAELSQKGLFRLTNSSTFGIGRAFFSQPLSFKNSSNGTSVSFSTTFVFAFVVDQGRLPG 81

Query: 186 -GIAFAVSPTKDFSTAIPSQYLGLFNSSNNGDPANHIVAIEFDVFKNVVFNDINDNHVGI 10
            G+AF ++P+K+ + A  +Q+LGLFN +NNGDP+NH+VAIE D F+N  FNDIN NHVGI
Sbjct: 82  HGMAFMIAPSKNLTGASSAQHLGLFNLTNNGDPSNHVVAIELDTFQNQEFNDINGNHVGI 141

Query: 9   DIN 1
           D+N
Sbjct: 142 DVN 144


>gb|AAP47579.1| receptor kinase Lecrk [Gossypium hirsutum]
          Length = 641

 Score =  130 bits (328), Expect = 8e-29
 Identities = 64/123 (52%), Positives = 83/123 (67%), Gaps = 4/123 (3%)
 Frame = -3

Query: 357 GGASVGTSSPVTLTNSESFKAGRVFYSFPLSFKNSTNASVNSFSTTFIFKIASR----NG 190
           G A + ++  + LTN    + G  FY  P+ FKNSTN SV SFS+TF+F I       +G
Sbjct: 38  GIAELTSNGLLKLTNKTVQETGHAFYPHPVDFKNSTNGSVFSFSSTFVFAILPEYPTLSG 97

Query: 189 QGIAFAVSPTKDFSTAIPSQYLGLFNSSNNGDPANHIVAIEFDVFKNVVFNDINDNHVGI 10
            GIAF ++PTK    ++PSQYLGLFN SNNG+  NH+VA+E D  ++  F+DINDNHVGI
Sbjct: 98  HGIAFVIAPTKGLPGSLPSQYLGLFNGSNNGNDTNHVVAVELDTIRSTEFDDINDNHVGI 157

Query: 9   DIN 1
           DIN
Sbjct: 158 DIN 160


>ref|XP_002534540.1| carbohydrate binding protein, putative [Ricinus communis]
           gi|223525085|gb|EEF27844.1| carbohydrate binding
           protein, putative [Ricinus communis]
          Length = 657

 Score =  130 bits (328), Expect = 8e-29
 Identities = 68/123 (55%), Positives = 88/123 (71%), Gaps = 4/123 (3%)
 Frame = -3

Query: 357 GGASVGTSSPVTLTNSESFKAGRVFYSFPLSFKNSTNASVNSFSTTFIFKI----ASRNG 190
           G A V T+    LT++ SF  G VFY+ PL+FKNS++    SFSTTF+  I    +S NG
Sbjct: 35  GVAEVSTNGLFRLTDTTSFTVGHVFYAQPLTFKNSSSGKALSFSTTFVIAIVVDKSSLNG 94

Query: 189 QGIAFAVSPTKDFSTAIPSQYLGLFNSSNNGDPANHIVAIEFDVFKNVVFNDINDNHVGI 10
            G+AF ++P+K+ S A  +Q LGLFN +N+GDP+N IVA+EFD F+N  FNDINDNHVGI
Sbjct: 95  HGMAFVIAPSKELSGA-SAQNLGLFNRTNDGDPSNRIVAVEFDNFQNQEFNDINDNHVGI 153

Query: 9   DIN 1
           DIN
Sbjct: 154 DIN 156


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