BLASTX nr result

ID: Coptis24_contig00033446 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033446
         (686 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI39607.3| unnamed protein product [Vitis vinifera]              382   e-104
ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-l...   382   e-104
ref|XP_003553704.1| PREDICTED: NHL repeat-containing protein 2-l...   370   e-100
gb|AAG51506.1|AC058785_9 hypothetical protein [Arabidopsis thali...   369   e-100
ref|NP_564718.2| haloacid dehalogenase-like hydrolase domain-con...   369   e-100

>emb|CBI39607.3| unnamed protein product [Vitis vinifera]
          Length = 1002

 Score =  382 bits (980), Expect = e-104
 Identities = 179/226 (79%), Positives = 201/226 (88%)
 Frame = +2

Query: 8   PIFEQNQGVPRSSRIQQFINYIADVEARGNAPTVPEFPSKLDWLNTAPLQFRRDLKGKVV 187
           P F +N+G  ++ RIQQF+NYI+D+E+RGNA TVPEFPS+LDWLN+APLQ RRDLKGKVV
Sbjct: 311 PTFGKNEGESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPLQLRRDLKGKVV 370

Query: 188 LLDFWTYCCINCIHVLPDLEFLEKKYKDQPFTVVGVHSAKFDNEKDLEAIRNAVLRYNIN 367
           +LDFWTYCCINC+HVLPDLEFLE KYKD+PFTVVGVHSAKFDNEKDLEAIRNAVLRY IN
Sbjct: 371 VLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIN 430

Query: 368 HPVVNDGDMNLWRELGVSSWPTFAVVSPSGKLLAQIAGEGHRKXXXXXXXXXXXFYGEKK 547
           HPVVNDGDM LWRELGV+SWPTFAVV P+GKLLAQ++GEG RK           FYGEKK
Sbjct: 431 HPVVNDGDMYLWRELGVNSWPTFAVVGPNGKLLAQLSGEGRRKDLDDIVAAALIFYGEKK 490

Query: 548 MLENTPLSLSLEKDNDPRLLTSPLKFPGKLAVDALNNRLFISDSNH 685
           ML+N+PL LSLEK+NDPRLLTSPLKFPGKLA+D +NNRLFISDSNH
Sbjct: 491 MLDNSPLPLSLEKENDPRLLTSPLKFPGKLAIDVINNRLFISDSNH 536


>ref|XP_002277564.1| PREDICTED: NHL repeat-containing protein 2-like [Vitis vinifera]
          Length = 1078

 Score =  382 bits (980), Expect = e-104
 Identities = 179/226 (79%), Positives = 201/226 (88%)
 Frame = +2

Query: 8    PIFEQNQGVPRSSRIQQFINYIADVEARGNAPTVPEFPSKLDWLNTAPLQFRRDLKGKVV 187
            P F +N+G  ++ RIQQF+NYI+D+E+RGNA TVPEFPS+LDWLN+APLQ RRDLKGKVV
Sbjct: 387  PTFGKNEGESQTGRIQQFVNYISDLESRGNATTVPEFPSQLDWLNSAPLQLRRDLKGKVV 446

Query: 188  LLDFWTYCCINCIHVLPDLEFLEKKYKDQPFTVVGVHSAKFDNEKDLEAIRNAVLRYNIN 367
            +LDFWTYCCINC+HVLPDLEFLE KYKD+PFTVVGVHSAKFDNEKDLEAIRNAVLRY IN
Sbjct: 447  VLDFWTYCCINCMHVLPDLEFLETKYKDKPFTVVGVHSAKFDNEKDLEAIRNAVLRYGIN 506

Query: 368  HPVVNDGDMNLWRELGVSSWPTFAVVSPSGKLLAQIAGEGHRKXXXXXXXXXXXFYGEKK 547
            HPVVNDGDM LWRELGV+SWPTFAVV P+GKLLAQ++GEG RK           FYGEKK
Sbjct: 507  HPVVNDGDMYLWRELGVNSWPTFAVVGPNGKLLAQLSGEGRRKDLDDIVAAALIFYGEKK 566

Query: 548  MLENTPLSLSLEKDNDPRLLTSPLKFPGKLAVDALNNRLFISDSNH 685
            ML+N+PL LSLEK+NDPRLLTSPLKFPGKLA+D +NNRLFISDSNH
Sbjct: 567  MLDNSPLPLSLEKENDPRLLTSPLKFPGKLAIDVINNRLFISDSNH 612


>ref|XP_003553704.1| PREDICTED: NHL repeat-containing protein 2-like [Glycine max]
          Length = 1098

 Score =  370 bits (951), Expect = e-100
 Identities = 173/226 (76%), Positives = 195/226 (86%)
 Frame = +2

Query: 8    PIFEQNQGVPRSSRIQQFINYIADVEARGNAPTVPEFPSKLDWLNTAPLQFRRDLKGKVV 187
            P  EQ +   R  RIQQF+NYI+D+E+RGNA  VPEFPSKLDWLNTAPLQFRRDLKGKVV
Sbjct: 406  PPLEQKEDNSRDDRIQQFVNYISDLESRGNAQIVPEFPSKLDWLNTAPLQFRRDLKGKVV 465

Query: 188  LLDFWTYCCINCIHVLPDLEFLEKKYKDQPFTVVGVHSAKFDNEKDLEAIRNAVLRYNIN 367
            LLDFWTYCCINC+HVLP+L+ LEKKYKD PF VVGVHSAKFDNEKD EAIRNAVLRY I+
Sbjct: 466  LLDFWTYCCINCMHVLPELDVLEKKYKDMPFVVVGVHSAKFDNEKDSEAIRNAVLRYGIS 525

Query: 368  HPVVNDGDMNLWRELGVSSWPTFAVVSPSGKLLAQIAGEGHRKXXXXXXXXXXXFYGEKK 547
            HPVVNDGDM LWR+LG++SWPTFA+V P+GK+LAQ+AGEGH+K           FYG++ 
Sbjct: 526  HPVVNDGDMYLWRKLGINSWPTFAIVGPNGKVLAQLAGEGHKKDLDDFVEAALLFYGKQN 585

Query: 548  MLENTPLSLSLEKDNDPRLLTSPLKFPGKLAVDALNNRLFISDSNH 685
            ML+NTP+SLSLEKDNDPRL TSPLKFPGKLA+D LNNRLFISDSNH
Sbjct: 586  MLDNTPISLSLEKDNDPRLSTSPLKFPGKLAIDVLNNRLFISDSNH 631


>gb|AAG51506.1|AC058785_9 hypothetical protein [Arabidopsis thaliana]
          Length = 1041

 Score =  369 bits (947), Expect = e-100
 Identities = 174/226 (76%), Positives = 196/226 (86%)
 Frame = +2

Query: 8    PIFEQNQGVPRSSRIQQFINYIADVEARGNAPTVPEFPSKLDWLNTAPLQFRRDLKGKVV 187
            P F QNQG     R+QQF++YIAD+E++  A TVPEFPSKLDWLNTAPLQFRRDLKGKVV
Sbjct: 366  PSFTQNQG---EGRVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVV 422

Query: 188  LLDFWTYCCINCIHVLPDLEFLEKKYKDQPFTVVGVHSAKFDNEKDLEAIRNAVLRYNIN 367
            +LDFWTYCCINC+HVLPDLEFLEKKYKD PFTVVGVHSAKFDNEKDL+AIRNAVLRY+I+
Sbjct: 423  ILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDIS 482

Query: 368  HPVVNDGDMNLWRELGVSSWPTFAVVSPSGKLLAQIAGEGHRKXXXXXXXXXXXFYGEKK 547
            HPVVNDGDM +WRELG++SWPTFAVVSP+GK++AQIAGEGHRK           +YG K 
Sbjct: 483  HPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYYGGKN 542

Query: 548  MLENTPLSLSLEKDNDPRLLTSPLKFPGKLAVDALNNRLFISDSNH 685
            +L++TPL   LEKDNDPRL TSPLKFPGKLA+D LNNRLFISDSNH
Sbjct: 543  VLDSTPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNH 588


>ref|NP_564718.2| haloacid dehalogenase-like hydrolase domain-containing protein
            [Arabidopsis thaliana] gi|17529226|gb|AAL38840.1| unknown
            protein [Arabidopsis thaliana]
            gi|332195279|gb|AEE33400.1| haloacid dehalogenase-like
            hydrolase domain-containing protein [Arabidopsis
            thaliana]
          Length = 1055

 Score =  369 bits (947), Expect = e-100
 Identities = 174/226 (76%), Positives = 196/226 (86%)
 Frame = +2

Query: 8    PIFEQNQGVPRSSRIQQFINYIADVEARGNAPTVPEFPSKLDWLNTAPLQFRRDLKGKVV 187
            P F QNQG     R+QQF++YIAD+E++  A TVPEFPSKLDWLNTAPLQFRRDLKGKVV
Sbjct: 366  PSFTQNQG---EGRVQQFVDYIADLESKQTATTVPEFPSKLDWLNTAPLQFRRDLKGKVV 422

Query: 188  LLDFWTYCCINCIHVLPDLEFLEKKYKDQPFTVVGVHSAKFDNEKDLEAIRNAVLRYNIN 367
            +LDFWTYCCINC+HVLPDLEFLEKKYKD PFTVVGVHSAKFDNEKDL+AIRNAVLRY+I+
Sbjct: 423  ILDFWTYCCINCMHVLPDLEFLEKKYKDMPFTVVGVHSAKFDNEKDLDAIRNAVLRYDIS 482

Query: 368  HPVVNDGDMNLWRELGVSSWPTFAVVSPSGKLLAQIAGEGHRKXXXXXXXXXXXFYGEKK 547
            HPVVNDGDM +WRELG++SWPTFAVVSP+GK++AQIAGEGHRK           +YG K 
Sbjct: 483  HPVVNDGDMYMWRELGINSWPTFAVVSPNGKVIAQIAGEGHRKDLDDVVAAALTYYGGKN 542

Query: 548  MLENTPLSLSLEKDNDPRLLTSPLKFPGKLAVDALNNRLFISDSNH 685
            +L++TPL   LEKDNDPRL TSPLKFPGKLA+D LNNRLFISDSNH
Sbjct: 543  VLDSTPLPTRLEKDNDPRLATSPLKFPGKLAIDTLNNRLFISDSNH 588


Top