BLASTX nr result

ID: Coptis24_contig00033437 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033437
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI21495.3| unnamed protein product [Vitis vinifera]              132   2e-29
ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268...   132   2e-29
ref|XP_002532942.1| conserved hypothetical protein [Ricinus comm...   121   5e-26
ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820...   114   6e-24
gb|AAM62516.1| unknown [Arabidopsis thaliana]                          98   6e-19

>emb|CBI21495.3| unnamed protein product [Vitis vinifera]
          Length = 369

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/109 (57%), Positives = 88/109 (80%)
 Frame = +2

Query: 14  KEEYVGMFRKALGMPRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEKRVIPRYF 193
           ++E + MFR+  G+ R S EKL+LG+EFF+  + FE+ +L+  P +LM SME RVIPRY 
Sbjct: 253 EQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSMEDRVIPRYR 312

Query: 194 VLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 340
           VL+ILKSK+LLKR  SF+NV+ L+++EFLDK+IS++ D+AEELL+AYKG
Sbjct: 313 VLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKG 361


>ref|XP_002276330.1| PREDICTED: uncharacterized protein LOC100268158 [Vitis vinifera]
          Length = 388

 Score =  132 bits (333), Expect = 2e-29
 Identities = 63/109 (57%), Positives = 88/109 (80%)
 Frame = +2

Query: 14  KEEYVGMFRKALGMPRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEKRVIPRYF 193
           ++E + MFR+  G+ R S EKL+LG+EFF+  + FE+ +L+  P +LM SME RVIPRY 
Sbjct: 272 EQECIEMFRRTPGLLRASEEKLKLGMEFFMNTMKFEKTLLVHRPTILMLSMEDRVIPRYR 331

Query: 194 VLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 340
           VL+ILKSK+LLKR  SF+NV+ L+++EFLDK+IS++ D+AEELL+AYKG
Sbjct: 332 VLQILKSKRLLKREPSFINVLSLTDEEFLDKFISRFADDAEELLVAYKG 380


>ref|XP_002532942.1| conserved hypothetical protein [Ricinus communis]
           gi|223527293|gb|EEF29446.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 366

 Score =  121 bits (304), Expect = 5e-26
 Identities = 62/118 (52%), Positives = 87/118 (73%)
 Frame = +2

Query: 20  EYVGMFRKALGMPRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEKRVIPRYFVL 199
           E   MFRK  G+ R S +KL+LGL+FF+  I F+R+VL+  P  LM SME+RVIPRY VL
Sbjct: 249 ECTEMFRKQPGLLRSSEKKLKLGLDFFINTIKFKREVLVYRPTCLMLSMEERVIPRYKVL 308

Query: 200 EILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKGGLANVDTSEES 373
           EI+K KKLLK+  SF+NV+ L+E+EF+ K+I+ + D+AEELL+AY+    +  + E+S
Sbjct: 309 EIMKLKKLLKKQPSFINVLNLTEEEFVQKFIASFPDDAEELLVAYRSHTLDSYSEEKS 366


>ref|XP_003532734.1| PREDICTED: uncharacterized protein LOC100820280 [Glycine max]
          Length = 1401

 Score =  114 bits (286), Expect = 6e-24
 Identities = 58/114 (50%), Positives = 83/114 (72%), Gaps = 3/114 (2%)
 Frame = +2

Query: 8    CF---KEEYVGMFRKALGMPRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEKRV 178
            CF    EE + MFR++  + R S +K+++GLEFFL  +   + VL+  PR+LMYSME RV
Sbjct: 1283 CFGFSNEEGLQMFRRSPTLLRTSEKKVKVGLEFFLHTVMLPKSVLVHQPRVLMYSMEDRV 1342

Query: 179  IPRYFVLEILKSKKLLKRNTSFVNVIQLSEDEFLDKYISKYRDNAEELLIAYKG 340
            +PRY V ++L  KKL K+  S+++++ LSE+ FLDKYI  +R+NAEELL+AYKG
Sbjct: 1343 LPRYRVFQLLIEKKLCKKVPSYIHLLCLSEEVFLDKYIPHFRENAEELLVAYKG 1396


>gb|AAM62516.1| unknown [Arabidopsis thaliana]
          Length = 391

 Score = 98.2 bits (243), Expect = 6e-19
 Identities = 50/113 (44%), Positives = 79/113 (69%), Gaps = 5/113 (4%)
 Frame = +2

Query: 14  KEEYVGMFRKALGMPRVSVEKLRLGLEFFLKGIGFERDVLLRMPRLLMYSMEKRVIPRYF 193
           ++E   + R++ G+ R S +KL LG EF+LK +G ER+ L + P +L Y++EKRVIPR  
Sbjct: 264 EDEITDIIRRSPGLIRCSEDKLTLGFEFYLKRMGIEREALAKRPCVLSYNLEKRVIPRLK 323

Query: 194 VLEILKSKKLL----KRNTSFVNVIQLSEDEFLDKYISKYRDN-AEELLIAYK 337
           VL+IL+ K LL    K+  + V +++++E+ FL+KY+ ++ D  AEELL+AYK
Sbjct: 324 VLQILREKGLLLKEEKKKKNMVGIVEMTEEAFLEKYVVRFGDEIAEELLVAYK 376


Top