BLASTX nr result
ID: Coptis24_contig00033432
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033432 (492 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CBI37043.3| unnamed protein product [Vitis vinifera] 115 5e-24 ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat... 101 7e-20 emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera] 87 1e-15 gb|ACZ82299.1| cellulose synthase [Phyllostachys edulis] 78 7e-13 gb|AAT66941.1| CesA2 [Acacia mangium] 77 1e-12 >emb|CBI37043.3| unnamed protein product [Vitis vinifera] Length = 904 Score = 115 bits (287), Expect = 5e-24 Identities = 55/91 (60%), Positives = 71/91 (78%) Frame = +3 Query: 219 MSFKSILWRERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLELDNEIRFPLS 398 MSF S +W ERL QWKLAR++ L + GSQ+E+PD +D S++E+E+ Q E+DNE R LS Sbjct: 1 MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMDNESRQFLS 60 Query: 399 RKVPVPSSRINPYRVIILFRVVILAFFLHYR 491 RKVP+P S I PYRV ++FR+VILAFFL YR Sbjct: 61 RKVPIPPSMIYPYRVSVIFRLVILAFFLRYR 91 >ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8 [UDP-forming]-like [Vitis vinifera] Length = 887 Score = 101 bits (251), Expect = 7e-20 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 25/116 (21%) Frame = +3 Query: 219 MSFKSILWRERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLEL--------- 371 MSF S +W ERL QWKLAR++ L + GSQ+E+PD +D S++E+E+ Q E+ Sbjct: 1 MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEY 60 Query: 372 ----------------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491 DNE R LSRKVP+P S I PYRV ++FR+VILAFFL YR Sbjct: 61 VFSIRFRMLLNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILAFFLRYR 116 >emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera] Length = 1036 Score = 87.4 bits (215), Expect = 1e-15 Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 25/107 (23%) Frame = +3 Query: 246 ERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLEL------------------ 371 +RL QWKLAR++ L + GSQ+E+PD +D S++E+E+ Q E+ Sbjct: 133 DRLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEYVFSRRFRML 192 Query: 372 -------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491 DNE R LSRKVP+P S I PYRV ++FR+VIL FFL YR Sbjct: 193 LNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILVFFLRYR 239 >gb|ACZ82299.1| cellulose synthase [Phyllostachys edulis] Length = 982 Score = 78.2 bits (191), Expect = 7e-13 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%) Frame = +3 Query: 225 FKSILWRERLSQWKLARQQFLFQF---GSQKEVPDATDCASLEEVEVHQLELDNEIRFPL 395 + S+ W+ER+ WK +Q+ L Q GS K+ D A L+ L L +E R PL Sbjct: 100 YGSVAWKERMESWK-QKQERLHQMRNDGSGKDWDGDGDDADLD------LPLMDEARQPL 152 Query: 396 SRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491 SRK+P+PSS+INPYR+II+ R+V+L FF HYR Sbjct: 153 SRKIPIPSSQINPYRMIIIIRLVVLGFFFHYR 184 >gb|AAT66941.1| CesA2 [Acacia mangium] Length = 1075 Score = 77.0 bits (188), Expect = 1e-12 Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 2/89 (2%) Frame = +3 Query: 231 SILWRERLSQWKLARQQFLFQFGSQKEVPD--ATDCASLEEVEVHQLELDNEIRFPLSRK 404 ++ W+ER+ WK+ +++ + + + + A D + +V V L++E R PLSRK Sbjct: 197 NVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRK 256 Query: 405 VPVPSSRINPYRVIILFRVVILAFFLHYR 491 V +PSSRINPYR++I+ R++IL FFLHYR Sbjct: 257 VSIPSSRINPYRMVIILRLIILCFFLHYR 285