BLASTX nr result

ID: Coptis24_contig00033432 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033432
         (492 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI37043.3| unnamed protein product [Vitis vinifera]              115   5e-24
ref|XP_002273575.1| PREDICTED: probable cellulose synthase A cat...   101   7e-20
emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]    87   1e-15
gb|ACZ82299.1| cellulose synthase [Phyllostachys edulis]               78   7e-13
gb|AAT66941.1| CesA2 [Acacia mangium]                                  77   1e-12

>emb|CBI37043.3| unnamed protein product [Vitis vinifera]
          Length = 904

 Score =  115 bits (287), Expect = 5e-24
 Identities = 55/91 (60%), Positives = 71/91 (78%)
 Frame = +3

Query: 219 MSFKSILWRERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLELDNEIRFPLS 398
           MSF S +W ERL QWKLAR++ L + GSQ+E+PD +D  S++E+E+ Q E+DNE R  LS
Sbjct: 1   MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMDNESRQFLS 60

Query: 399 RKVPVPSSRINPYRVIILFRVVILAFFLHYR 491
           RKVP+P S I PYRV ++FR+VILAFFL YR
Sbjct: 61  RKVPIPPSMIYPYRVSVIFRLVILAFFLRYR 91


>ref|XP_002273575.1| PREDICTED: probable cellulose synthase A catalytic subunit 8
           [UDP-forming]-like [Vitis vinifera]
          Length = 887

 Score =  101 bits (251), Expect = 7e-20
 Identities = 55/116 (47%), Positives = 71/116 (61%), Gaps = 25/116 (21%)
 Frame = +3

Query: 219 MSFKSILWRERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLEL--------- 371
           MSF S +W ERL QWKLAR++ L + GSQ+E+PD +D  S++E+E+ Q E+         
Sbjct: 1   MSFNSNIWEERLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEY 60

Query: 372 ----------------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491
                           DNE R  LSRKVP+P S I PYRV ++FR+VILAFFL YR
Sbjct: 61  VFSIRFRMLLNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILAFFLRYR 116


>emb|CAN75642.1| hypothetical protein VITISV_029179 [Vitis vinifera]
          Length = 1036

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/107 (44%), Positives = 64/107 (59%), Gaps = 25/107 (23%)
 Frame = +3

Query: 246 ERLSQWKLARQQFLFQFGSQKEVPDATDCASLEEVEVHQLEL------------------ 371
           +RL QWKLAR++ L + GSQ+E+PD +D  S++E+E+ Q E+                  
Sbjct: 133 DRLCQWKLARERLLRRTGSQEEIPDPSDLGSVDEMELRQPEMYANYCHSEYVFSRRFRML 192

Query: 372 -------DNEIRFPLSRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491
                  DNE R  LSRKVP+P S I PYRV ++FR+VIL FFL YR
Sbjct: 193 LNITWQWDNESRQFLSRKVPIPPSMIYPYRVSVIFRLVILVFFLRYR 239


>gb|ACZ82299.1| cellulose synthase [Phyllostachys edulis]
          Length = 982

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 43/92 (46%), Positives = 59/92 (64%), Gaps = 3/92 (3%)
 Frame = +3

Query: 225 FKSILWRERLSQWKLARQQFLFQF---GSQKEVPDATDCASLEEVEVHQLELDNEIRFPL 395
           + S+ W+ER+  WK  +Q+ L Q    GS K+     D A L+      L L +E R PL
Sbjct: 100 YGSVAWKERMESWK-QKQERLHQMRNDGSGKDWDGDGDDADLD------LPLMDEARQPL 152

Query: 396 SRKVPVPSSRINPYRVIILFRVVILAFFLHYR 491
           SRK+P+PSS+INPYR+II+ R+V+L FF HYR
Sbjct: 153 SRKIPIPSSQINPYRMIIIIRLVVLGFFFHYR 184


>gb|AAT66941.1| CesA2 [Acacia mangium]
          Length = 1075

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 37/89 (41%), Positives = 59/89 (66%), Gaps = 2/89 (2%)
 Frame = +3

Query: 231 SILWRERLSQWKLARQQFLFQFGSQKEVPD--ATDCASLEEVEVHQLELDNEIRFPLSRK 404
           ++ W+ER+  WK+ +++ +    + +   +  A D  +  +V V    L++E R PLSRK
Sbjct: 197 NVAWKERVDGWKMKQEKNVVPMSTGQAASERGAGDIDASTDVLVDDSLLNDEARQPLSRK 256

Query: 405 VPVPSSRINPYRVIILFRVVILAFFLHYR 491
           V +PSSRINPYR++I+ R++IL FFLHYR
Sbjct: 257 VSIPSSRINPYRMVIILRLIILCFFLHYR 285


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