BLASTX nr result
ID: Coptis24_contig00033422
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033422 (227 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi... 75 6e-12 emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera] 74 2e-11 ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c... 72 5e-11 gb|ABK26521.1| unknown [Picea sitchensis] 72 5e-11 emb|CBI27010.3| unnamed protein product [Vitis vinifera] 72 6e-11 >ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790, chloroplastic-like [Glycine max] Length = 573 Score = 75.1 bits (183), Expect = 6e-12 Identities = 36/74 (48%), Positives = 49/74 (66%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 L+EAL+ I M ++ D RLW +LLG I +AE AA SL+ LQ +NP + L+N+ Sbjct: 354 LDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNI 413 Query: 47 YAKFGRWEEVAKIR 6 YAK G+WE+VAK R Sbjct: 414 YAKAGKWEKVAKFR 427 >emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera] Length = 1309 Score = 73.6 bits (179), Expect = 2e-11 Identities = 38/74 (51%), Positives = 48/74 (64%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 L+EALK I M I+ D LW + LG D +AE AA SL+ LQS+NP + L+N+ Sbjct: 414 LDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNI 473 Query: 47 YAKFGRWEEVAKIR 6 YA GRWE+VAKIR Sbjct: 474 YANAGRWEDVAKIR 487 Score = 70.5 bits (171), Expect = 1e-10 Identities = 37/74 (50%), Positives = 46/74 (62%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 L+EALK I M + D LW + LG D +AE AA SL+ LQ +NP I L+N+ Sbjct: 1090 LDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNI 1149 Query: 47 YAKFGRWEEVAKIR 6 YA GRWE+VAKIR Sbjct: 1150 YANAGRWEDVAKIR 1163 >ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis] gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130, putative [Ricinus communis] Length = 1530 Score = 72.0 bits (175), Expect = 5e-11 Identities = 37/74 (50%), Positives = 48/74 (64%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 L EA +FI M ++ D LW SLLG I +AE AAKSL+ LQ +NP I L+N+ Sbjct: 1435 LTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNI 1494 Query: 47 YAKFGRWEEVAKIR 6 YA G+W++VAKIR Sbjct: 1495 YANAGQWKDVAKIR 1508 >gb|ABK26521.1| unknown [Picea sitchensis] Length = 370 Score = 72.0 bits (175), Expect = 5e-11 Identities = 32/74 (43%), Positives = 48/74 (64%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 L+EAL FI +MP++ + +W SLLG + G+ +AE A + LI L ENP + L+N+ Sbjct: 151 LDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNI 210 Query: 47 YAKFGRWEEVAKIR 6 YA GRW++ K+R Sbjct: 211 YAAAGRWDDAGKVR 224 >emb|CBI27010.3| unnamed protein product [Vitis vinifera] Length = 481 Score = 71.6 bits (174), Expect = 6e-11 Identities = 31/74 (41%), Positives = 50/74 (67%) Frame = -1 Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48 LE+A+ F+ KMP++AD +W LLG I + +AE+A + LI L+ +NP + L+N+ Sbjct: 326 LEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNI 385 Query: 47 YAKFGRWEEVAKIR 6 Y GRWE+VA+++ Sbjct: 386 YGDAGRWEDVARLK 399