BLASTX nr result

ID: Coptis24_contig00033422 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033422
         (227 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containi...    75   6e-12
emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]    74   2e-11
ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus c...    72   5e-11
gb|ABK26521.1| unknown [Picea sitchensis]                              72   5e-11
emb|CBI27010.3| unnamed protein product [Vitis vinifera]               72   6e-11

>ref|XP_003518209.1| PREDICTED: pentatricopeptide repeat-containing protein At3g46790,
           chloroplastic-like [Glycine max]
          Length = 573

 Score = 75.1 bits (183), Expect = 6e-12
 Identities = 36/74 (48%), Positives = 49/74 (66%)
 Frame = -1

Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
           L+EAL+ I  M ++ D RLW +LLG   I     +AE AA SL+ LQ +NP   + L+N+
Sbjct: 354 LDEALRLIEAMTVEKDERLWSALLGACRIHSKMELAEKAANSLLELQPQNPGHYVLLSNI 413

Query: 47  YAKFGRWEEVAKIR 6
           YAK G+WE+VAK R
Sbjct: 414 YAKAGKWEKVAKFR 427


>emb|CAN68552.1| hypothetical protein VITISV_014227 [Vitis vinifera]
          Length = 1309

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 38/74 (51%), Positives = 48/74 (64%)
 Frame = -1

Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
           L+EALK I  M I+ D  LW + LG      D  +AE AA SL+ LQS+NP   + L+N+
Sbjct: 414 LDEALKLIKSMTIEKDEGLWGAFLGACRTHKDVVLAEKAATSLLELQSQNPGHYVLLSNI 473

Query: 47  YAKFGRWEEVAKIR 6
           YA  GRWE+VAKIR
Sbjct: 474 YANAGRWEDVAKIR 487



 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 37/74 (50%), Positives = 46/74 (62%)
 Frame = -1

Query: 227  LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
            L+EALK I  M  + D  LW + LG      D  +AE AA SL+ LQ +NP   I L+N+
Sbjct: 1090 LDEALKLIXSMTXEKDEGLWGAFLGACRTHKDVXLAEKAATSLLELQPQNPGHYILLSNI 1149

Query: 47   YAKFGRWEEVAKIR 6
            YA  GRWE+VAKIR
Sbjct: 1150 YANAGRWEDVAKIR 1163


>ref|XP_002530335.1| Bipolar kinesin KRP-130, putative [Ricinus communis]
            gi|223530139|gb|EEF32051.1| Bipolar kinesin KRP-130,
            putative [Ricinus communis]
          Length = 1530

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 37/74 (50%), Positives = 48/74 (64%)
 Frame = -1

Query: 227  LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
            L EA +FI  M ++ D  LW SLLG   I     +AE AAKSL+ LQ +NP   I L+N+
Sbjct: 1435 LTEAFRFIENMTVEKDEGLWSSLLGACRIHKRIDLAEKAAKSLLELQPQNPGNYILLSNI 1494

Query: 47   YAKFGRWEEVAKIR 6
            YA  G+W++VAKIR
Sbjct: 1495 YANAGQWKDVAKIR 1508


>gb|ABK26521.1| unknown [Picea sitchensis]
          Length = 370

 Score = 72.0 bits (175), Expect = 5e-11
 Identities = 32/74 (43%), Positives = 48/74 (64%)
 Frame = -1

Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
           L+EAL FI +MP++ +  +W SLLG   + G+  +AE A + LI L  ENP   + L+N+
Sbjct: 151 LDEALNFINQMPVEPNASVWGSLLGACRVHGNIELAERAVEQLIELTPENPGTYVLLSNI 210

Query: 47  YAKFGRWEEVAKIR 6
           YA  GRW++  K+R
Sbjct: 211 YAAAGRWDDAGKVR 224


>emb|CBI27010.3| unnamed protein product [Vitis vinifera]
          Length = 481

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 31/74 (41%), Positives = 50/74 (67%)
 Frame = -1

Query: 227 LEEALKFIAKMPIQADVRLWESLLGTAVIQGDKSIAEIAAKSLITLQSENPEVLIQLANV 48
           LE+A+ F+ KMP++AD  +W  LLG   I  +  +AE+A + LI L+ +NP   + L+N+
Sbjct: 326 LEQAMAFVRKMPVEADGVIWAGLLGACRIYKNVELAELALQRLIELEPKNPANYVMLSNI 385

Query: 47  YAKFGRWEEVAKIR 6
           Y   GRWE+VA+++
Sbjct: 386 YGDAGRWEDVARLK 399


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