BLASTX nr result

ID: Coptis24_contig00033410 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033410
         (362 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI29229.3| unnamed protein product [Vitis vinifera]              181   7e-44
ref|XP_002266353.1| PREDICTED: uncharacterized protein LOC100256...   181   7e-44
ref|XP_002513407.1| conserved hypothetical protein [Ricinus comm...   173   1e-41
ref|XP_002332203.1| predicted protein [Populus trichocarpa] gi|2...   173   1e-41
ref|XP_002464099.1| hypothetical protein SORBIDRAFT_01g012310 [S...   171   6e-41

>emb|CBI29229.3| unnamed protein product [Vitis vinifera]
          Length = 444

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/120 (72%), Positives = 100/120 (83%)
 Frame = -1

Query: 362 KEVGFVKKWDFMSVIEKYPSIFHVSGGNNAPIVLKLTEKAKKIADEEPGVREIMEPILVS 183
           K+VGFV KW+FM+VIEKYPSIF V+GGN  P  ++LTEKAK+IADEE   R+ MEPILV 
Sbjct: 134 KQVGFVHKWNFMAVIEKYPSIFRVNGGNRTPPSVELTEKAKRIADEETEARKQMEPILVE 193

Query: 182 RLRKLLMMSMDCRIPLEKIEFIEKELGLPENFKECLIPKYPDFFSVIDVNGFPYLNLENW 3
            LRKLLMMS+DCR+PLE IEFIE ELGLP++FKE LIPKYP+FFSV D NG  YL LENW
Sbjct: 194 NLRKLLMMSVDCRVPLENIEFIESELGLPQDFKETLIPKYPEFFSVKDFNGRAYLQLENW 253


>ref|XP_002266353.1| PREDICTED: uncharacterized protein LOC100256382 [Vitis vinifera]
          Length = 409

 Score =  181 bits (458), Expect = 7e-44
 Identities = 87/120 (72%), Positives = 100/120 (83%)
 Frame = -1

Query: 362 KEVGFVKKWDFMSVIEKYPSIFHVSGGNNAPIVLKLTEKAKKIADEEPGVREIMEPILVS 183
           K+VGFV KW+FM+VIEKYPSIF V+GGN  P  ++LTEKAK+IADEE   R+ MEPILV 
Sbjct: 99  KQVGFVHKWNFMAVIEKYPSIFRVNGGNRTPPSVELTEKAKRIADEETEARKQMEPILVE 158

Query: 182 RLRKLLMMSMDCRIPLEKIEFIEKELGLPENFKECLIPKYPDFFSVIDVNGFPYLNLENW 3
            LRKLLMMS+DCR+PLE IEFIE ELGLP++FKE LIPKYP+FFSV D NG  YL LENW
Sbjct: 159 NLRKLLMMSVDCRVPLENIEFIESELGLPQDFKETLIPKYPEFFSVKDFNGRAYLQLENW 218


>ref|XP_002513407.1| conserved hypothetical protein [Ricinus communis]
           gi|223547315|gb|EEF48810.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 413

 Score =  173 bits (439), Expect = 1e-41
 Identities = 84/121 (69%), Positives = 99/121 (81%), Gaps = 1/121 (0%)
 Frame = -1

Query: 362 KEVGFVKKWDFMSVIEKYPSIFHVSGGNNA-PIVLKLTEKAKKIADEEPGVREIMEPILV 186
           K+VGFV+KW+FM+VIEKYP IFHV GGN+  P  + LT+KA K+A EE   RE MEPILV
Sbjct: 107 KQVGFVQKWNFMAVIEKYPLIFHVGGGNSGIPPFVSLTDKAMKVASEEAQARESMEPILV 166

Query: 185 SRLRKLLMMSMDCRIPLEKIEFIEKELGLPENFKECLIPKYPDFFSVIDVNGFPYLNLEN 6
             LRKLLM+S+DCR+PLEKIEFIE ELGLP++FK  LIPKYP+FFSV D NG  YL+LEN
Sbjct: 167 KNLRKLLMISIDCRVPLEKIEFIENELGLPQDFKNSLIPKYPEFFSVKDFNGKAYLHLEN 226

Query: 5   W 3
           W
Sbjct: 227 W 227


>ref|XP_002332203.1| predicted protein [Populus trichocarpa] gi|222875310|gb|EEF12441.1|
           predicted protein [Populus trichocarpa]
          Length = 411

 Score =  173 bits (439), Expect = 1e-41
 Identities = 86/122 (70%), Positives = 99/122 (81%), Gaps = 2/122 (1%)
 Frame = -1

Query: 362 KEVGFVKKWDFMSVIEKYPSIFHVSGGNNA--PIVLKLTEKAKKIADEEPGVREIMEPIL 189
           KEVGFV+KW+FMSVIEKYP+IF V GG+N   P  +  T KA+KIA EE   RE+MEPIL
Sbjct: 99  KEVGFVQKWNFMSVIEKYPAIFRVGGGSNTRTPPFVAFTAKAEKIAREEAEARELMEPIL 158

Query: 188 VSRLRKLLMMSMDCRIPLEKIEFIEKELGLPENFKECLIPKYPDFFSVIDVNGFPYLNLE 9
           V  LRKLLM+S+DCR+PLEKIEFI+ ELGLP++FK  LIPKYPDFFSV DVNG  YL LE
Sbjct: 159 VKNLRKLLMLSVDCRVPLEKIEFIQNELGLPQDFKSSLIPKYPDFFSVKDVNGKAYLLLE 218

Query: 8   NW 3
           NW
Sbjct: 219 NW 220


>ref|XP_002464099.1| hypothetical protein SORBIDRAFT_01g012310 [Sorghum bicolor]
           gi|241917953|gb|EER91097.1| hypothetical protein
           SORBIDRAFT_01g012310 [Sorghum bicolor]
          Length = 384

 Score =  171 bits (433), Expect = 6e-41
 Identities = 83/122 (68%), Positives = 102/122 (83%), Gaps = 2/122 (1%)
 Frame = -1

Query: 362 KEVGFVKKWDFMSVIEKYPSIFHVSGGNNA--PIVLKLTEKAKKIADEEPGVREIMEPIL 189
           KEVGFV+KW+F+S+IE++P+IFHVSGG+ +  PI + LTEKA+KI+ EE   RE+MEPIL
Sbjct: 82  KEVGFVQKWNFLSLIERHPNIFHVSGGSASREPISVTLTEKARKISSEEAEARELMEPIL 141

Query: 188 VSRLRKLLMMSMDCRIPLEKIEFIEKELGLPENFKECLIPKYPDFFSVIDVNGFPYLNLE 9
           V  LRKLLMMSMDC+IPLEKIE I+ ELGLP+NFK  LIP+YPDFFS+ DV G  +L LE
Sbjct: 142 VRNLRKLLMMSMDCQIPLEKIELIQSELGLPKNFKSNLIPRYPDFFSIRDVKGLDHLCLE 201

Query: 8   NW 3
           NW
Sbjct: 202 NW 203


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