BLASTX nr result

ID: Coptis24_contig00033391 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033391
         (274 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|2...    90   2e-16
emb|CBI36884.3| unnamed protein product [Vitis vinifera]               89   3e-16
ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus c...    89   3e-16
ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]       89   3e-16
ref|NP_192138.1| endoglucanase 17 [Arabidopsis thaliana] gi|7522...    89   4e-16

>ref|XP_002320998.1| predicted protein [Populus trichocarpa] gi|222861771|gb|EEE99313.1|
           predicted protein [Populus trichocarpa]
           gi|347466573|gb|AEO97199.1| endo-1,4-beta-glucanase
           [Populus trichocarpa] gi|347466627|gb|AEO97226.1|
           endo-1,4-beta-glucanase [Populus trichocarpa]
          Length = 510

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 46/72 (63%), Positives = 51/72 (70%)
 Frame = -1

Query: 220 DNCVGQVGDANKDHAC*ERPEDMDT*RSVFKIDKNSPGSDVXXXXXXXXXXASFVFRKID 41
           D    QVGDANKDHAC ERPEDMDT RSV+K+DKNSPGS+V          AS VFR+ D
Sbjct: 151 DTIYVQVGDANKDHACWERPEDMDTPRSVYKVDKNSPGSEVAAETAAALAAASLVFRRCD 210

Query: 40  PSYPSLLSRRAI 5
           P+Y  LL RRAI
Sbjct: 211 PTYAKLLVRRAI 222


>emb|CBI36884.3| unnamed protein product [Vitis vinifera]
          Length = 439

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/72 (63%), Positives = 51/72 (70%)
 Frame = -1

Query: 220 DNCVGQVGDANKDHAC*ERPEDMDT*RSVFKIDKNSPGSDVXXXXXXXXXXASFVFRKID 41
           D    QVGDANKDHAC ERPEDMDT RSVFK+D+N+PGSDV          AS VFR+ D
Sbjct: 80  DTIYVQVGDANKDHACWERPEDMDTSRSVFKVDRNTPGSDVAAETAAALAAASVVFRRSD 139

Query: 40  PSYPSLLSRRAI 5
           P+Y  LL RRAI
Sbjct: 140 PTYSKLLIRRAI 151


>ref|XP_002523114.1| endo-1,4-beta-glucanase, putative [Ricinus communis]
           gi|223537676|gb|EEF39299.1| endo-1,4-beta-glucanase,
           putative [Ricinus communis]
          Length = 510

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 47/72 (65%), Positives = 51/72 (70%)
 Frame = -1

Query: 220 DNCVGQVGDANKDHAC*ERPEDMDT*RSVFKIDKNSPGSDVXXXXXXXXXXASFVFRKID 41
           D    QVGDANKDHAC ERPEDMDT RSVFKID+NSPGS+V          AS VF+K D
Sbjct: 151 DTIYVQVGDANKDHACWERPEDMDTPRSVFKIDRNSPGSEVAAETAAALAAASLVFKKND 210

Query: 40  PSYPSLLSRRAI 5
           P+Y  LL RRAI
Sbjct: 211 PTYSKLLVRRAI 222


>ref|XP_002271736.1| PREDICTED: endoglucanase 17 [Vitis vinifera]
          Length = 511

 Score = 89.4 bits (220), Expect = 3e-16
 Identities = 46/72 (63%), Positives = 51/72 (70%)
 Frame = -1

Query: 220 DNCVGQVGDANKDHAC*ERPEDMDT*RSVFKIDKNSPGSDVXXXXXXXXXXASFVFRKID 41
           D    QVGDANKDHAC ERPEDMDT RSVFK+D+N+PGSDV          AS VFR+ D
Sbjct: 152 DTIYVQVGDANKDHACWERPEDMDTSRSVFKVDRNTPGSDVAAETAAALAAASVVFRRSD 211

Query: 40  PSYPSLLSRRAI 5
           P+Y  LL RRAI
Sbjct: 212 PTYSKLLIRRAI 223


>ref|NP_192138.1| endoglucanase 17 [Arabidopsis thaliana]
           gi|75220064|sp|O81416.1|GUN17_ARATH RecName:
           Full=Endoglucanase 17; AltName: Full=Endo-1,4-beta
           glucanase 17; Flags: Precursor gi|3377800|gb|AAC28173.1|
           T2H3.5 [Arabidopsis thaliana] gi|7268989|emb|CAB80722.1|
           putative endo-1, 4-beta glucanase [Arabidopsis thaliana]
           gi|19310536|gb|AAL85001.1| AT4g02290/T2H3_5 [Arabidopsis
           thaliana] gi|20855941|gb|AAM26639.1| AT4g02290/T2H3_5
           [Arabidopsis thaliana] gi|332656751|gb|AEE82151.1|
           endoglucanase 17 [Arabidopsis thaliana]
          Length = 516

 Score = 89.0 bits (219), Expect = 4e-16
 Identities = 46/73 (63%), Positives = 51/73 (69%)
 Frame = -1

Query: 220 DNCVGQVGDANKDHAC*ERPEDMDT*RSVFKIDKNSPGSDVXXXXXXXXXXASFVFRKID 41
           D    QVGDANKDH+C ERPEDMDT RSVFK+DKN PGSDV          A+ VFRK D
Sbjct: 157 DTIYVQVGDANKDHSCWERPEDMDTVRSVFKVDKNIPGSDVAAETAAALAAAAIVFRKSD 216

Query: 40  PSYPSLLSRRAIS 2
           PSY  +L +RAIS
Sbjct: 217 PSYSKVLLKRAIS 229


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