BLASTX nr result

ID: Coptis24_contig00033377 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033377
         (273 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   140   1e-31
ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis s...   140   1e-31
ref|XP_003553539.1| PREDICTED: DNA replication licensing factor ...   138   4e-31
ref|XP_003625578.1| DNA replication licensing factor MCM6 [Medic...   138   4e-31
ref|XP_002525183.1| DNA replication licensing factor MCM8, putat...   138   5e-31

>ref|XP_004156637.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 786

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/78 (87%), Positives = 73/78 (93%)
 Frame = -2

Query: 272 IVDLGRSGGMSQQKEAKRFLSALNKHSELAQKDCFSISEIYSLADRIGLRVPDIDTFVDN 93
           ++D GRSGGMSQQKEAKRFLSALNK SEL QKDCFSISEIYSLAD+IGLRVPDIDTF++N
Sbjct: 696 VLDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADKIGLRVPDIDTFIEN 755

Query: 92  LNSVGYLLKKGPKMYQVL 39
           LN VGYLLKKGPK YQVL
Sbjct: 756 LNCVGYLLKKGPKTYQVL 773


>ref|XP_004137962.1| PREDICTED: DNA helicase MCM8-like [Cucumis sativus]
          Length = 793

 Score =  140 bits (353), Expect = 1e-31
 Identities = 68/78 (87%), Positives = 73/78 (93%)
 Frame = -2

Query: 272 IVDLGRSGGMSQQKEAKRFLSALNKHSELAQKDCFSISEIYSLADRIGLRVPDIDTFVDN 93
           ++D GRSGGMSQQKEAKRFLSALNK SEL QKDCFSISEIYSLAD+IGLRVPDIDTF++N
Sbjct: 703 VLDFGRSGGMSQQKEAKRFLSALNKQSELQQKDCFSISEIYSLADKIGLRVPDIDTFIEN 762

Query: 92  LNSVGYLLKKGPKMYQVL 39
           LN VGYLLKKGPK YQVL
Sbjct: 763 LNCVGYLLKKGPKTYQVL 780


>ref|XP_003553539.1| PREDICTED: DNA replication licensing factor MCM8-like [Glycine max]
          Length = 742

 Score =  138 bits (348), Expect = 4e-31
 Identities = 67/78 (85%), Positives = 73/78 (93%)
 Frame = -2

Query: 272 IVDLGRSGGMSQQKEAKRFLSALNKHSELAQKDCFSISEIYSLADRIGLRVPDIDTFVDN 93
           +VD GRSGGMSQQKEAKRFL+ALNK SEL QKDCFS+SEIYSLADRI L+VPDIDTF++N
Sbjct: 651 VVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRICLKVPDIDTFIEN 710

Query: 92  LNSVGYLLKKGPKMYQVL 39
           LNSVGYLLKKGPK YQVL
Sbjct: 711 LNSVGYLLKKGPKTYQVL 728


>ref|XP_003625578.1| DNA replication licensing factor MCM6 [Medicago truncatula]
            gi|355500593|gb|AES81796.1| DNA replication licensing
            factor MCM6 [Medicago truncatula]
          Length = 884

 Score =  138 bits (348), Expect = 4e-31
 Identities = 66/78 (84%), Positives = 73/78 (93%)
 Frame = -2

Query: 272  IVDLGRSGGMSQQKEAKRFLSALNKHSELAQKDCFSISEIYSLADRIGLRVPDIDTFVDN 93
            +VD GRSGGMSQQKEAKRFL+ALNK SEL QKDCFS+SEIYSLADRI L+VPD+DTF++N
Sbjct: 793  VVDFGRSGGMSQQKEAKRFLNALNKQSELEQKDCFSVSEIYSLADRISLKVPDMDTFIEN 852

Query: 92   LNSVGYLLKKGPKMYQVL 39
            LNSVGYLLKKGPK YQVL
Sbjct: 853  LNSVGYLLKKGPKTYQVL 870


>ref|XP_002525183.1| DNA replication licensing factor MCM8, putative [Ricinus communis]
           gi|223535480|gb|EEF37149.1| DNA replication licensing
           factor MCM8, putative [Ricinus communis]
          Length = 757

 Score =  138 bits (347), Expect = 5e-31
 Identities = 70/77 (90%), Positives = 72/77 (93%)
 Frame = -2

Query: 269 VDLGRSGGMSQQKEAKRFLSALNKHSELAQKDCFSISEIYSLADRIGLRVPDIDTFVDNL 90
           VD GRSGGMSQQKEAKRFLSALNK SEL QKD FSISEIYSLADRIGLRVPDIDTFVDNL
Sbjct: 670 VDFGRSGGMSQQKEAKRFLSALNKQSELQQKDTFSISEIYSLADRIGLRVPDIDTFVDNL 729

Query: 89  NSVGYLLKKGPKMYQVL 39
           NSVGYLLKKG K++QVL
Sbjct: 730 NSVGYLLKKGSKLFQVL 746


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