BLASTX nr result
ID: Coptis24_contig00033374
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033374 (943 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] 106 5e-24 emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] 106 5e-24 emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] 99 8e-22 emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] 98 3e-21 gb|ABA99152.1| retrotransposon protein, putative, unclassified [... 104 7e-21 >emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera] Length = 1501 Score = 106 bits (265), Expect(2) = 5e-24 Identities = 46/67 (68%), Positives = 56/67 (83%) Frame = +3 Query: 18 GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197 G D+ DTFSPVVK TT+R +L++AVT WP+RQLDVKNAFL GTL+E ++M QPPG+ DP Sbjct: 898 GLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDP 957 Query: 198 RFPNHVC 218 RFP HVC Sbjct: 958 RFPTHVC 964 Score = 31.2 bits (69), Expect(2) = 5e-24 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +2 Query: 305 FSNFLLQSGFRCSWADSSMFI 367 FS+FLL GF CS AD+S+F+ Sbjct: 984 FSSFLLTLGFSCSRADTSLFV 1004 >emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera] Length = 1239 Score = 106 bits (265), Expect(2) = 5e-24 Identities = 46/67 (68%), Positives = 56/67 (83%) Frame = +3 Query: 18 GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197 G D+ DTFSPVVK TT+R +L++AVT WP+RQLDVKNAFL GTL+E ++M QPPG+ DP Sbjct: 781 GLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDP 840 Query: 198 RFPNHVC 218 RFP HVC Sbjct: 841 RFPTHVC 847 Score = 31.2 bits (69), Expect(2) = 5e-24 Identities = 13/21 (61%), Positives = 17/21 (80%) Frame = +2 Query: 305 FSNFLLQSGFRCSWADSSMFI 367 FS+FLL GF CS AD+S+F+ Sbjct: 867 FSSFLLTLGFSCSRADTSLFV 887 >emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera] Length = 1361 Score = 99.0 bits (245), Expect(2) = 8e-22 Identities = 43/67 (64%), Positives = 53/67 (79%) Frame = +3 Query: 18 GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197 G DF DTFSPVV+P T+R IL++AVT W + QLDVKNAFL G L+E ++M QPPG+ DP Sbjct: 914 GLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTDP 973 Query: 198 RFPNHVC 218 +FP HVC Sbjct: 974 QFPQHVC 980 Score = 31.6 bits (70), Expect(2) = 8e-22 Identities = 15/27 (55%), Positives = 18/27 (66%) Frame = +2 Query: 305 FSNFLLQSGFRCSWADSSMFIRRDSRG 385 FS+FLL+ GF S ADSS+F S G Sbjct: 1000 FSSFLLKHGFHSSQADSSLFFYHSSLG 1026 >emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera] Length = 1095 Score = 98.2 bits (243), Expect(2) = 3e-21 Identities = 42/67 (62%), Positives = 53/67 (79%) Frame = +3 Query: 18 GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197 G D+ DTFSPVVK +T+R +L++AV+ WP+RQLDVKN FL G L ET++M QPPG+ DP Sbjct: 655 GLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNVFLNGILHETVYMEQPPGYVDP 714 Query: 198 RFPNHVC 218 R P HVC Sbjct: 715 RHPLHVC 721 Score = 30.4 bits (67), Expect(2) = 3e-21 Identities = 12/21 (57%), Positives = 18/21 (85%) Frame = +2 Query: 305 FSNFLLQSGFRCSWADSSMFI 367 FS+FLL+ GF C+ AD+S+F+ Sbjct: 741 FSSFLLKLGFFCNCADTSLFV 761 >gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa Japonica Group] Length = 989 Score = 104 bits (260), Expect(2) = 7e-21 Identities = 46/72 (63%), Positives = 57/72 (79%) Frame = +3 Query: 3 FICKAGEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPP 182 F + G DFD TFSPVVKP T+RT+L++A++R WP+ QLDVKNAFL GTLSET+F QP Sbjct: 539 FTQRPGIDFDGTFSPVVKPATVRTVLSLALSRGWPVHQLDVKNAFLHGTLSETVFAAQPT 598 Query: 183 GFQDPRFPNHVC 218 GF+DP P +VC Sbjct: 599 GFEDPTHPGYVC 610 Score = 22.7 bits (47), Expect(2) = 7e-21 Identities = 9/21 (42%), Positives = 15/21 (71%) Frame = +2 Query: 305 FSNFLLQSGFRCSWADSSMFI 367 F+ F+L GF + AD+S+F+ Sbjct: 630 FATFILSLGFVNAKADTSLFV 650