BLASTX nr result

ID: Coptis24_contig00033374 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033374
         (943 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]   106   5e-24
emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]   106   5e-24
emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]    99   8e-22
emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]    98   3e-21
gb|ABA99152.1| retrotransposon protein, putative, unclassified [...   104   7e-21

>emb|CAN78022.1| hypothetical protein VITISV_015518 [Vitis vinifera]
          Length = 1501

 Score =  106 bits (265), Expect(2) = 5e-24
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +3

Query: 18   GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197
            G D+ DTFSPVVK TT+R +L++AVT  WP+RQLDVKNAFL GTL+E ++M QPPG+ DP
Sbjct: 898  GLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDP 957

Query: 198  RFPNHVC 218
            RFP HVC
Sbjct: 958  RFPTHVC 964



 Score = 31.2 bits (69), Expect(2) = 5e-24
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 305  FSNFLLQSGFRCSWADSSMFI 367
            FS+FLL  GF CS AD+S+F+
Sbjct: 984  FSSFLLTLGFSCSRADTSLFV 1004


>emb|CAN73071.1| hypothetical protein VITISV_032383 [Vitis vinifera]
          Length = 1239

 Score =  106 bits (265), Expect(2) = 5e-24
 Identities = 46/67 (68%), Positives = 56/67 (83%)
 Frame = +3

Query: 18  GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197
           G D+ DTFSPVVK TT+R +L++AVT  WP+RQLDVKNAFL GTL+E ++M QPPG+ DP
Sbjct: 781 GLDYTDTFSPVVKATTVRVVLSLAVTNKWPLRQLDVKNAFLNGTLTEHVYMEQPPGYIDP 840

Query: 198 RFPNHVC 218
           RFP HVC
Sbjct: 841 RFPTHVC 847



 Score = 31.2 bits (69), Expect(2) = 5e-24
 Identities = 13/21 (61%), Positives = 17/21 (80%)
 Frame = +2

Query: 305 FSNFLLQSGFRCSWADSSMFI 367
           FS+FLL  GF CS AD+S+F+
Sbjct: 867 FSSFLLTLGFSCSRADTSLFV 887


>emb|CAN61640.1| hypothetical protein VITISV_021909 [Vitis vinifera]
          Length = 1361

 Score = 99.0 bits (245), Expect(2) = 8e-22
 Identities = 43/67 (64%), Positives = 53/67 (79%)
 Frame = +3

Query: 18   GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197
            G DF DTFSPVV+P T+R IL++AVT  W + QLDVKNAFL G L+E ++M QPPG+ DP
Sbjct: 914  GLDFGDTFSPVVRPATVRIILSLAVTSGWRLHQLDVKNAFLHGFLNEEVYMEQPPGYTDP 973

Query: 198  RFPNHVC 218
            +FP HVC
Sbjct: 974  QFPQHVC 980



 Score = 31.6 bits (70), Expect(2) = 8e-22
 Identities = 15/27 (55%), Positives = 18/27 (66%)
 Frame = +2

Query: 305  FSNFLLQSGFRCSWADSSMFIRRDSRG 385
            FS+FLL+ GF  S ADSS+F    S G
Sbjct: 1000 FSSFLLKHGFHSSQADSSLFFYHSSLG 1026


>emb|CAN72527.1| hypothetical protein VITISV_009255 [Vitis vinifera]
          Length = 1095

 Score = 98.2 bits (243), Expect(2) = 3e-21
 Identities = 42/67 (62%), Positives = 53/67 (79%)
 Frame = +3

Query: 18  GEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPPGFQDP 197
           G D+ DTFSPVVK +T+R +L++AV+  WP+RQLDVKN FL G L ET++M QPPG+ DP
Sbjct: 655 GLDYKDTFSPVVKASTVRVVLSLAVSHKWPLRQLDVKNVFLNGILHETVYMEQPPGYVDP 714

Query: 198 RFPNHVC 218
           R P HVC
Sbjct: 715 RHPLHVC 721



 Score = 30.4 bits (67), Expect(2) = 3e-21
 Identities = 12/21 (57%), Positives = 18/21 (85%)
 Frame = +2

Query: 305 FSNFLLQSGFRCSWADSSMFI 367
           FS+FLL+ GF C+ AD+S+F+
Sbjct: 741 FSSFLLKLGFFCNCADTSLFV 761


>gb|ABA99152.1| retrotransposon protein, putative, unclassified [Oryza sativa
           Japonica Group]
          Length = 989

 Score =  104 bits (260), Expect(2) = 7e-21
 Identities = 46/72 (63%), Positives = 57/72 (79%)
 Frame = +3

Query: 3   FICKAGEDFDDTFSPVVKPTTIRTILAVAVTRSWPIRQLDVKNAFLQGTLSETLFMRQPP 182
           F  + G DFD TFSPVVKP T+RT+L++A++R WP+ QLDVKNAFL GTLSET+F  QP 
Sbjct: 539 FTQRPGIDFDGTFSPVVKPATVRTVLSLALSRGWPVHQLDVKNAFLHGTLSETVFAAQPT 598

Query: 183 GFQDPRFPNHVC 218
           GF+DP  P +VC
Sbjct: 599 GFEDPTHPGYVC 610



 Score = 22.7 bits (47), Expect(2) = 7e-21
 Identities = 9/21 (42%), Positives = 15/21 (71%)
 Frame = +2

Query: 305 FSNFLLQSGFRCSWADSSMFI 367
           F+ F+L  GF  + AD+S+F+
Sbjct: 630 FATFILSLGFVNAKADTSLFV 650


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