BLASTX nr result

ID: Coptis24_contig00033362 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033362
         (408 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282286.1| PREDICTED: indole-3-acetic acid-induced prot...   147   9e-34
emb|CAN71368.1| hypothetical protein VITISV_014692 [Vitis vinifera]   147   9e-34
ref|XP_003537074.1| PREDICTED: auxin-induced protein 15A-like [G...   135   5e-30
ref|XP_003518212.1| PREDICTED: auxin-induced protein 15A-like [G...   132   2e-29
ref|XP_003553600.1| PREDICTED: indole-3-acetic acid-induced prot...   129   2e-28

>ref|XP_002282286.1| PREDICTED: indole-3-acetic acid-induced protein ARG7 [Vitis
           vinifera] gi|297740132|emb|CBI30314.3| unnamed protein
           product [Vitis vinifera]
          Length = 125

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +2

Query: 134 IGSSGRKPSNYECLLSDKED-SPTSTTPTGFFAVYVGEERQRFVVPTSFLVHPLFKMLLE 310
           IG   R+PS++ECLL D E+ SP+ TTPTG FAVYVGEERQRFVVPTSFL HPLFKMLLE
Sbjct: 19  IGGGDREPSHHECLLRDYEEGSPSGTTPTGSFAVYVGEERQRFVVPTSFLSHPLFKMLLE 78

Query: 311 KAQNEFGYEQRDGLVVPCNVSTFQEVVSAVEC 406
           KA NEFG++QR+GLVVPC+VSTFQEVV+AVEC
Sbjct: 79  KAYNEFGFDQRNGLVVPCSVSTFQEVVNAVEC 110


>emb|CAN71368.1| hypothetical protein VITISV_014692 [Vitis vinifera]
          Length = 120

 Score =  147 bits (371), Expect = 9e-34
 Identities = 72/92 (78%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +2

Query: 134 IGSSGRKPSNYECLLSDKED-SPTSTTPTGFFAVYVGEERQRFVVPTSFLVHPLFKMLLE 310
           IG   R+PS++ECLL D E+ SP+ TTPTG FAVYVGEERQRFVVPTSFL HPLFKMLLE
Sbjct: 14  IGGGDREPSHHECLLRDYEEGSPSGTTPTGSFAVYVGEERQRFVVPTSFLSHPLFKMLLE 73

Query: 311 KAQNEFGYEQRDGLVVPCNVSTFQEVVSAVEC 406
           KA NEFG++QR+GLVVPC+VSTFQEVV+AVEC
Sbjct: 74  KAYNEFGFDQRNGLVVPCSVSTFQEVVNAVEC 105


>ref|XP_003537074.1| PREDICTED: auxin-induced protein 15A-like [Glycine max]
          Length = 128

 Score =  135 bits (339), Expect = 5e-30
 Identities = 66/93 (70%), Positives = 77/93 (82%), Gaps = 3/93 (3%)
 Frame = +2

Query: 137 GSSGRKPSNYECLLSDKED---SPTSTTPTGFFAVYVGEERQRFVVPTSFLVHPLFKMLL 307
           G+    P   ECLL   E+   SP+STTPTGFFA+YVGEERQR+VVPTS+L HPLFKMLL
Sbjct: 21  GADHSDPPYQECLLKGYEEGKESPSSTTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLL 80

Query: 308 EKAQNEFGYEQRDGLVVPCNVSTFQEVVSAVEC 406
           EKA NEFG+ QR+GLVVPC+VSTFQEVV+A+EC
Sbjct: 81  EKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIEC 113


>ref|XP_003518212.1| PREDICTED: auxin-induced protein 15A-like [Glycine max]
          Length = 128

 Score =  132 bits (333), Expect = 2e-29
 Identities = 65/93 (69%), Positives = 76/93 (81%), Gaps = 3/93 (3%)
 Frame = +2

Query: 137 GSSGRKPSNYECLLSDKED---SPTSTTPTGFFAVYVGEERQRFVVPTSFLVHPLFKMLL 307
           G+    P   ECLL   E+   SP+S TPTGFFA+YVGEERQR+VVPTS+L HPLFKMLL
Sbjct: 21  GADHSDPPYQECLLKGYEEDKESPSSPTPTGFFALYVGEERQRYVVPTSYLSHPLFKMLL 80

Query: 308 EKAQNEFGYEQRDGLVVPCNVSTFQEVVSAVEC 406
           EKA NEFG+ QR+GLVVPC+VSTFQEVV+A+EC
Sbjct: 81  EKAYNEFGFAQRNGLVVPCSVSTFQEVVNAIEC 113


>ref|XP_003553600.1| PREDICTED: indole-3-acetic acid-induced protein ARG7-like [Glycine
           max]
          Length = 127

 Score =  129 bits (324), Expect = 2e-28
 Identities = 60/85 (70%), Positives = 75/85 (88%), Gaps = 1/85 (1%)
 Frame = +2

Query: 155 PSNYECLLSD-KEDSPTSTTPTGFFAVYVGEERQRFVVPTSFLVHPLFKMLLEKAQNEFG 331
           P+++ECLL + +E+   +T PTGFFA+YVGEERQR+VVPT +L HPLFKMLLEKA NEFG
Sbjct: 28  PAHHECLLKEYEEECAINTPPTGFFALYVGEERQRYVVPTRYLSHPLFKMLLEKAYNEFG 87

Query: 332 YEQRDGLVVPCNVSTFQEVVSAVEC 406
           + QR+GLVVPC+VSTFQEVV+A+EC
Sbjct: 88  FSQRNGLVVPCSVSTFQEVVNAIEC 112


Top