BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033361
         (316 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containi...   154   1e-35
emb|CBI40853.3| unnamed protein product [Vitis vinifera]              154   1e-35
ref|XP_002864963.1| pentatricopeptide repeat-containing protein ...   150   1e-34
ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containi...   145   3e-33
ref|NP_201360.1| pentatricopeptide repeat-containing protein [Ar...   144   6e-33

>ref|XP_002266254.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Vitis vinifera]
          Length = 751

 Score =  154 bits (388), Expect = 1e-35
 Identities = 71/105 (67%), Positives = 91/105 (86%)
 Frame = -2

Query: 315 SYAQGGYGREAVRLFDQMQNLGLEPNDMTYLSVLSACSNAGLLDEGCRIFFSLKSNGNVD 136
           SYAQ G+G EA++LF  M++ GLEPN++T+L VLSAC+NAGLL+EGC IF S +++GN++
Sbjct: 454 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 513

Query: 135 LSRDHYACMVDLLGRAGRLEEAEWLIAQVENPDVVLWRTLLSACK 1
           L++DHYACMVDLLGRAGRL+EAE LI QV   DVV+WRTLLSAC+
Sbjct: 514 LTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACR 558


>emb|CBI40853.3| unnamed protein product [Vitis vinifera]
          Length = 749

 Score =  154 bits (388), Expect = 1e-35
 Identities = 71/105 (67%), Positives = 91/105 (86%)
 Frame = -2

Query: 315 SYAQGGYGREAVRLFDQMQNLGLEPNDMTYLSVLSACSNAGLLDEGCRIFFSLKSNGNVD 136
           SYAQ G+G EA++LF  M++ GLEPN++T+L VLSAC+NAGLL+EGC IF S +++GN++
Sbjct: 423 SYAQNGFGHEALQLFSGMKDTGLEPNNVTWLGVLSACNNAGLLEEGCHIFSSARNSGNIE 482

Query: 135 LSRDHYACMVDLLGRAGRLEEAEWLIAQVENPDVVLWRTLLSACK 1
           L++DHYACMVDLLGRAGRL+EAE LI QV   DVV+WRTLLSAC+
Sbjct: 483 LTKDHYACMVDLLGRAGRLKEAEMLINQVNISDVVIWRTLLSACR 527


>ref|XP_002864963.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297310798|gb|EFH41222.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 720

 Score =  150 bits (379), Expect = 1e-34
 Identities = 71/105 (67%), Positives = 89/105 (84%)
 Frame = -2

Query: 315 SYAQGGYGREAVRLFDQMQNLGLEPNDMTYLSVLSACSNAGLLDEGCRIFFSLKSNGNVD 136
           SYAQ G+GREA+ LF++M NLGL+PND+T LSVL AC+N+GL++EGC +F S + +  + 
Sbjct: 425 SYAQNGFGREALELFERMINLGLQPNDVTVLSVLLACNNSGLVEEGCELFDSFRKD-KIM 483

Query: 135 LSRDHYACMVDLLGRAGRLEEAEWLIAQVENPDVVLWRTLLSACK 1
           L+ DHYACMVD+LGRAGRLEEAE LI +V NPD+VLWRTLLSACK
Sbjct: 484 LTNDHYACMVDMLGRAGRLEEAEMLITEVTNPDLVLWRTLLSACK 528


>ref|XP_003533423.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g65570-like [Glycine max]
          Length = 676

 Score =  145 bits (366), Expect = 3e-33
 Identities = 62/105 (59%), Positives = 90/105 (85%)
 Frame = -2

Query: 315 SYAQGGYGREAVRLFDQMQNLGLEPNDMTYLSVLSACSNAGLLDEGCRIFFSLKSNGNVD 136
           +YAQ G+G EA+ LF++++N+GL PN +T++S+L AC+NAGL++EGC+IF S+++N N++
Sbjct: 379 AYAQNGFGHEALELFERLKNMGLVPNGVTFISILLACNNAGLVEEGCQIFASIRNNHNIE 438

Query: 135 LSRDHYACMVDLLGRAGRLEEAEWLIAQVENPDVVLWRTLLSACK 1
           L+ DH+ CM+DLLGR+ RLEEA  LI +V NPDVVLWRTLL++CK
Sbjct: 439 LTIDHFTCMIDLLGRSRRLEEAAMLIEEVRNPDVVLWRTLLNSCK 483


>ref|NP_201360.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75180382|sp|Q9LSL8.1|PP446_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g65570 gi|8978285|dbj|BAA98176.1| unnamed protein
           product [Arabidopsis thaliana]
           gi|332010689|gb|AED98072.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 738

 Score =  144 bits (364), Expect = 6e-33
 Identities = 70/105 (66%), Positives = 87/105 (82%)
 Frame = -2

Query: 315 SYAQGGYGREAVRLFDQMQNLGLEPNDMTYLSVLSACSNAGLLDEGCRIFFSLKSNGNVD 136
           SYAQ G+GREA+ LF++M NLGL+PND+T LSVL AC+N+ L++EGC +F S + +  + 
Sbjct: 443 SYAQNGFGREALDLFERMINLGLQPNDVTVLSVLLACNNSRLVEEGCELFDSFRKD-KIM 501

Query: 135 LSRDHYACMVDLLGRAGRLEEAEWLIAQVENPDVVLWRTLLSACK 1
           L+ DHYACMVDLLGRAGRLEEAE L  +V NPD+VLWRTLLSACK
Sbjct: 502 LTNDHYACMVDLLGRAGRLEEAEMLTTEVINPDLVLWRTLLSACK 546