BLASTX nr result

ID: Coptis24_contig00033318 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033318
         (280 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI35134.3| unnamed protein product [Vitis vinifera]               99   5e-19
ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vi...    99   5e-19
ref|XP_002521485.1| vesicle docking protein P115, putative [Rici...    98   8e-19
ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|2...    91   1e-16
ref|XP_004171929.1| PREDICTED: golgin candidate 6-like, partial ...    85   5e-15

>emb|CBI35134.3| unnamed protein product [Vitis vinifera]
          Length = 906

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 65/138 (47%), Positives = 72/138 (52%), Gaps = 47/138 (34%)
 Frame = +1

Query: 1    NATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKTKIETEA 177
            NA LAED+AKTGG  +S+  Q A G  ERVQVETLRRDLQEA QR+E+LK+EK KIE+EA
Sbjct: 729  NANLAEDLAKTGGGSISQPEQRAGGASERVQVETLRRDLQEASQRLEMLKTEKAKIESEA 788

Query: 178  SMYCNL----------------------------------------------NAEGREET 219
            SMY NL                                               AE REE 
Sbjct: 789  SMYQNLAGKMESDLQSLSDAYNSLEQANYHLEKEVKALKSGGATPSPDIDAIKAEAREEA 848

Query: 220  QKEGEAELNDLLAEQGGE 273
            QKE EAELNDLL   G E
Sbjct: 849  QKESEAELNDLLVCLGQE 866


>ref|XP_002272168.1| PREDICTED: golgin candidate 6-like [Vitis vinifera]
          Length = 915

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 65/138 (47%), Positives = 72/138 (52%), Gaps = 47/138 (34%)
 Frame = +1

Query: 1    NATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKTKIETEA 177
            NA LAED+AKTGG  +S+  Q A G  ERVQVETLRRDLQEA QR+E+LK+EK KIE+EA
Sbjct: 738  NANLAEDLAKTGGGSISQPEQRAGGASERVQVETLRRDLQEASQRLEMLKTEKAKIESEA 797

Query: 178  SMYCNL----------------------------------------------NAEGREET 219
            SMY NL                                               AE REE 
Sbjct: 798  SMYQNLAGKMESDLQSLSDAYNSLEQANYHLEKEVKALKSGGATPSPDIDAIKAEAREEA 857

Query: 220  QKEGEAELNDLLAEQGGE 273
            QKE EAELNDLL   G E
Sbjct: 858  QKESEAELNDLLVCLGQE 875


>ref|XP_002521485.1| vesicle docking protein P115, putative [Ricinus communis]
            gi|223539384|gb|EEF40975.1| vesicle docking protein P115,
            putative [Ricinus communis]
          Length = 911

 Score = 97.8 bits (242), Expect = 8e-19
 Identities = 65/138 (47%), Positives = 74/138 (53%), Gaps = 47/138 (34%)
 Frame = +1

Query: 1    NATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKTKIETEA 177
            NATLAED+AK GG+  S+S+Q A+G  ERVQ ETLRRDLQEA QR+E+LK+EK+KIETEA
Sbjct: 732  NATLAEDLAKIGGSASSQSDQRASGGLERVQAETLRRDLQEANQRIEMLKAEKSKIETEA 791

Query: 178  SMYCNL----------------------------------------------NAEGREET 219
            S Y NL                                               AE REE 
Sbjct: 792  STYQNLAGKMESDLKSLSDAYNSLEEANFHLEKEVKALKNGGSSAVPDIKAVKAEAREEA 851

Query: 220  QKEGEAELNDLLAEQGGE 273
            QKE EAELNDLL   G E
Sbjct: 852  QKESEAELNDLLVCLGQE 869


>ref|XP_002298552.1| predicted protein [Populus trichocarpa] gi|222845810|gb|EEE83357.1|
            predicted protein [Populus trichocarpa]
          Length = 915

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 61/138 (44%), Positives = 71/138 (51%), Gaps = 47/138 (34%)
 Frame = +1

Query: 1    NATLAEDMAKTGGAGVSRSNQ-ANGDKERVQVETLRRDLQEAKQRVELLKSEKTKIETEA 177
            NATLAE++ KTGG+  S+  Q  +G  +RVQ ETLRRDLQEA QR+E+LK+EK KIE+EA
Sbjct: 738  NATLAENLTKTGGSVSSQPEQRTSGGLDRVQAETLRRDLQEASQRIEMLKAEKAKIESEA 797

Query: 178  SMYCNL----------------------------------------------NAEGREET 219
            SMY NL                                               AE REE 
Sbjct: 798  SMYQNLAGKMESDLKSLSDAYNSLEQANFHLEKEVKALKSGGASTPPDVEAIRAEAREEA 857

Query: 220  QKEGEAELNDLLAEQGGE 273
            QKE EAELNDLL   G E
Sbjct: 858  QKESEAELNDLLVCLGQE 875


>ref|XP_004171929.1| PREDICTED: golgin candidate 6-like, partial [Cucumis sativus]
          Length = 436

 Score = 85.1 bits (209), Expect = 5e-15
 Identities = 56/137 (40%), Positives = 66/137 (48%), Gaps = 46/137 (33%)
 Frame = +1

Query: 1   NATLAEDMAKTGGAGVSRSNQANGDKERVQVETLRRDLQEAKQRVELLKSEKTKIETEAS 180
           NATLAED++K GG   S   +A+G   RVQ+ETL+RDLQE  +R+ELLK EK KIE++AS
Sbjct: 261 NATLAEDLSKIGGNDSSSEQRASGPSNRVQLETLQRDLQETSKRLELLKEEKVKIESDAS 320

Query: 181 MYCNL----------------------------------------------NAEGREETQ 222
            Y NL                                               AE REE Q
Sbjct: 321 YYKNLASKMESDLKSLSDAYNSLEQANYHLEKEAKALKSGEHSISPDIEAIKAEAREEAQ 380

Query: 223 KEGEAELNDLLAEQGGE 273
           KE E ELNDLL   G E
Sbjct: 381 KESETELNDLLVCLGQE 397


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