BLASTX nr result
ID: Coptis24_contig00033315
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033315 (320 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23... 64 2e-08 emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera] 64 2e-08 emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera] 62 6e-08 ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat... 61 8e-08 dbj|BAC65201.1| S haplotype-specific F-box protein c [Prunus dul... 60 2e-07 >ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Vitis vinifera] Length = 397 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%) Frame = -3 Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139 +++GS NGLVCF ++ + F+ NP TR + R+P LV GFGYDS+ Sbjct: 122 EIIGSYNGLVCFCIRDTE----NDIIFVWNPSTREFRRLPPISFMQCFHLVAYGFGYDSI 177 Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22 D+ KV R+ + +++ VF+L N WR IEN P F Sbjct: 178 ADDYKVTRVGCYCIGRYYEYQVRVFSLRGNVWRKIENFPCYLF 220 >emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera] Length = 453 Score = 63.5 bits (153), Expect = 2e-08 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%) Frame = -3 Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139 +++GS NGLVCF ++ + F+ NP TR + R+P LV GFGYDS+ Sbjct: 122 EIIGSYNGLVCFCIRDTE----NDIIFVWNPSTREFRRLPPISFMQCFHLVAYGFGYDSI 177 Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22 D+ KV R+ + +++ VF+L N WR IEN P F Sbjct: 178 ADDYKVTRVGCYCIGRYYEYQVRVFSLRGNVWRKIENFPCYLF 220 >emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera] Length = 265 Score = 61.6 bits (148), Expect = 6e-08 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%) Frame = -3 Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139 +++G NGLVC +++ F+ NP + R+P P LV+ FGYDS+ Sbjct: 100 EIVGCYNGLVCISIRDME----KDTIFVWNPSIKESKRLPSKPFEQLFYLVSYAFGYDSI 155 Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22 D+ KV R+ + + ++ EVF+L SN+WR I + P F Sbjct: 156 TDDYKVVRLVCCSINDSYEYHVEVFSLRSNAWRKIRSFPYFLF 198 >ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula] gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein [Medicago truncatula] Length = 392 Score = 61.2 bits (147), Expect = 8e-08 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 10/105 (9%) Frame = -3 Query: 318 YDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDS 142 Y ++GS NG+VC A N++ + NP T+ ++P K++ P+L+ GFGYDS Sbjct: 130 YFIIGSCNGIVCIA------DNHNGLVILWNPSTKKIKQLPLYEKSNGPTLMTFGFGYDS 183 Query: 141 VNDECKV-----FRILENGEKF----EAEVFALGSNSWRLIENLP 34 +ND KV + +L+ +F + +V LG+N WR I++ P Sbjct: 184 LNDNYKVVVVLAYLVLDEDYRFFNKNKVKVHTLGTNIWRTIQDYP 228 >dbj|BAC65201.1| S haplotype-specific F-box protein c [Prunus dulcis] gi|28866851|dbj|BAC65204.1| S haplotype-specific F-box protein c [Prunus dulcis] Length = 374 Score = 60.1 bits (144), Expect = 2e-07 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%) Frame = -3 Query: 318 YDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDS 142 Y + GS NGLVC S NY SP I NP R + P SP N V FG+ S Sbjct: 108 YGIYGSSNGLVCI---SDEILNYDSPIHIWNPSVRKFRTPPISPNNIKFVYVALQFGFHS 164 Query: 141 -VNDECKVFRILENGEKFEAEVFALGSNSWRLIENLP 34 VND V + N + F EV++L ++SW++IE +P Sbjct: 165 GVNDYKAVRMMRSNKDTFAVEVYSLRTDSWKMIETIP 201