BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033315
         (320 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23...    64   2e-08
emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]    64   2e-08
emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]    62   6e-08
ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncat...    61   8e-08
dbj|BAC65201.1| S haplotype-specific F-box protein c [Prunus dul...    60   2e-07

>ref|XP_002280424.1| PREDICTED: F-box/kelch-repeat protein At3g23880-like [Vitis
           vinifera]
          Length = 397

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
 Frame = -3

Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139
           +++GS NGLVCF ++       +   F+ NP TR + R+P         LV  GFGYDS+
Sbjct: 122 EIIGSYNGLVCFCIRDTE----NDIIFVWNPSTREFRRLPPISFMQCFHLVAYGFGYDSI 177

Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22
            D+ KV R+    +    +++  VF+L  N WR IEN P   F
Sbjct: 178 ADDYKVTRVGCYCIGRYYEYQVRVFSLRGNVWRKIENFPCYLF 220


>emb|CAN75235.1| hypothetical protein VITISV_008502 [Vitis vinifera]
          Length = 453

 Score = 63.5 bits (153), Expect = 2e-08
 Identities = 38/103 (36%), Positives = 55/103 (53%), Gaps = 5/103 (4%)
 Frame = -3

Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139
           +++GS NGLVCF ++       +   F+ NP TR + R+P         LV  GFGYDS+
Sbjct: 122 EIIGSYNGLVCFCIRDTE----NDIIFVWNPSTREFRRLPPISFMQCFHLVAYGFGYDSI 177

Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22
            D+ KV R+    +    +++  VF+L  N WR IEN P   F
Sbjct: 178 ADDYKVTRVGCYCIGRYYEYQVRVFSLRGNVWRKIENFPCYLF 220


>emb|CAN70931.1| hypothetical protein VITISV_034638 [Vitis vinifera]
          Length = 265

 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 34/103 (33%), Positives = 54/103 (52%), Gaps = 5/103 (4%)
 Frame = -3

Query: 315 DVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDSV 139
           +++G  NGLVC +++           F+ NP  +   R+P  P      LV+  FGYDS+
Sbjct: 100 EIVGCYNGLVCISIRDME----KDTIFVWNPSIKESKRLPSKPFEQLFYLVSYAFGYDSI 155

Query: 138 NDECKVFRI----LENGEKFEAEVFALGSNSWRLIENLPNVFF 22
            D+ KV R+    + +  ++  EVF+L SN+WR I + P   F
Sbjct: 156 TDDYKVVRLVCCSINDSYEYHVEVFSLRSNAWRKIRSFPYFLF 198


>ref|XP_003598443.1| F-box/kelch-repeat protein [Medicago truncatula]
           gi|355487491|gb|AES68694.1| F-box/kelch-repeat protein
           [Medicago truncatula]
          Length = 392

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 36/105 (34%), Positives = 59/105 (56%), Gaps = 10/105 (9%)
 Frame = -3

Query: 318 YDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDS 142
           Y ++GS NG+VC A       N++    + NP T+   ++P   K++ P+L+  GFGYDS
Sbjct: 130 YFIIGSCNGIVCIA------DNHNGLVILWNPSTKKIKQLPLYEKSNGPTLMTFGFGYDS 183

Query: 141 VNDECKV-----FRILENGEKF----EAEVFALGSNSWRLIENLP 34
           +ND  KV     + +L+   +F    + +V  LG+N WR I++ P
Sbjct: 184 LNDNYKVVVVLAYLVLDEDYRFFNKNKVKVHTLGTNIWRTIQDYP 228


>dbj|BAC65201.1| S haplotype-specific F-box protein c [Prunus dulcis]
           gi|28866851|dbj|BAC65204.1| S haplotype-specific F-box
           protein c [Prunus dulcis]
          Length = 374

 Score = 60.1 bits (144), Expect = 2e-07
 Identities = 39/97 (40%), Positives = 51/97 (52%), Gaps = 2/97 (2%)
 Frame = -3

Query: 318 YDVLGSVNGLVCFALQSWRYTNYSSPFFICNPITRAYLRVPKSPKNHTPSLVN-GFGYDS 142
           Y + GS NGLVC    S    NY SP  I NP  R +   P SP N     V   FG+ S
Sbjct: 108 YGIYGSSNGLVCI---SDEILNYDSPIHIWNPSVRKFRTPPISPNNIKFVYVALQFGFHS 164

Query: 141 -VNDECKVFRILENGEKFEAEVFALGSNSWRLIENLP 34
            VND   V  +  N + F  EV++L ++SW++IE +P
Sbjct: 165 GVNDYKAVRMMRSNKDTFAVEVYSLRTDSWKMIETIP 201