BLASTX nr result

ID: Coptis24_contig00033304 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033304
         (591 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246...   130   2e-28
emb|CAN60038.1| hypothetical protein VITISV_007803 [Vitis vinifera]   130   2e-28
ref|XP_004162674.1| PREDICTED: LOW QUALITY PROTEIN: uncharacteri...   120   2e-25
ref|XP_004148995.1| PREDICTED: uncharacterized protein LOC101209...   120   2e-25
ref|XP_002509971.1| conserved hypothetical protein [Ricinus comm...   112   5e-23

>ref|XP_002269028.1| PREDICTED: uncharacterized protein LOC100246151 [Vitis vinifera]
           gi|297742341|emb|CBI34490.3| unnamed protein product
           [Vitis vinifera]
          Length = 558

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/136 (51%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 LSKYTSHVSR-FRNFKAHASFAEQGGSNMLSDELLSRISSAKEADEALVMIAEKVESNEG 231
           L+ + S  S+ FR   +    A    S +L DELLSR+S A++ADEAL MIAE+ E + G
Sbjct: 31  LTFFVSPTSKSFRTKASENDVARASASKLLDDELLSRVSRARDADEALEMIAERWERSGG 90

Query: 230 VVSSEDCCLIIKGAFESNNAELALSVYSAMRMSFFDQGLSENGSFVRRWKWARPDVRIYA 51
           VV + DCC II  A + NNA+LALSV+ +MR S FDQ  S + + + RWKW+RPDVR+Y 
Sbjct: 91  VVDTADCCSIISAALDRNNADLALSVFYSMRSS-FDQVASGSSALIERWKWSRPDVRVYT 149

Query: 50  ALV*GLASSLQVSDAI 3
           +LV GLA+SL+VS+A+
Sbjct: 150 SLVRGLAASLRVSEAL 165


>emb|CAN60038.1| hypothetical protein VITISV_007803 [Vitis vinifera]
          Length = 556

 Score =  130 bits (327), Expect = 2e-28
 Identities = 70/136 (51%), Positives = 95/136 (69%), Gaps = 1/136 (0%)
 Frame = -2

Query: 407 LSKYTSHVSR-FRNFKAHASFAEQGGSNMLSDELLSRISSAKEADEALVMIAEKVESNEG 231
           L+ + S  S+ FR   +    A    S +L DELLSR+S A++ADEAL MIAE+ E + G
Sbjct: 31  LTFFVSPTSKSFRTKASENDVARASASKLLDDELLSRVSRARDADEALEMIAERWERSGG 90

Query: 230 VVSSEDCCLIIKGAFESNNAELALSVYSAMRMSFFDQGLSENGSFVRRWKWARPDVRIYA 51
           VV + DCC II  A + NNA+LALSV+ +MR S FDQ  S + + + RWKW+RPDVR+Y 
Sbjct: 91  VVDTADCCSIISAALDRNNADLALSVFYSMRSS-FDQVASGSSALIERWKWSRPDVRVYT 149

Query: 50  ALV*GLASSLQVSDAI 3
           +LV GLA+SL+VS+A+
Sbjct: 150 SLVRGLAASLRVSEAL 165


>ref|XP_004162674.1| PREDICTED: LOW QUALITY PROTEIN: uncharacterized LOC101209802
           [Cucumis sativus]
          Length = 578

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 EQGGSNMLSDELLSRISSAKEADEALVMIAEKVESNEGVVSSEDCCLIIKGAFESNNAEL 165
           E   S +L DEL+  +S AK+ADEAL MI +K   + G VS  DC LII  A + NN EL
Sbjct: 72  ENPASELLDDELIVVVSGAKDADEALGMIGDKSGRSGGTVSVSDCRLIISAALKRNNPEL 131

Query: 164 ALSVYSAMRMSFFD--QGLSENGSFVRRWKWARPDVRIYAALV*GLASSLQVSDAI 3
           ALSV+ AMR +F+   +G++EN S V RWKW+RPDV +Y  L+ GLA+SL+VSDA+
Sbjct: 132 ALSVFYAMRSTFYQAWEGVNENASIVERWKWSRPDVHVYTLLIEGLAASLRVSDAL 187


>ref|XP_004148995.1| PREDICTED: uncharacterized protein LOC101209802 [Cucumis sativus]
          Length = 578

 Score =  120 bits (300), Expect = 2e-25
 Identities = 62/116 (53%), Positives = 81/116 (69%), Gaps = 2/116 (1%)
 Frame = -2

Query: 344 EQGGSNMLSDELLSRISSAKEADEALVMIAEKVESNEGVVSSEDCCLIIKGAFESNNAEL 165
           E   S +L DEL+  +S AK+ADEAL MI +K   + G VS  DC LII  A + NN EL
Sbjct: 72  ENPASELLDDELIVVVSGAKDADEALGMIGDKSGRSGGTVSVSDCRLIISAALKRNNPEL 131

Query: 164 ALSVYSAMRMSFFD--QGLSENGSFVRRWKWARPDVRIYAALV*GLASSLQVSDAI 3
           ALSV+ AMR +F+   +G++EN S V RWKW+RPDV +Y  L+ GLA+SL+VSDA+
Sbjct: 132 ALSVFYAMRSTFYQAWEGVNENASIVERWKWSRPDVHVYTLLIEGLAASLRVSDAL 187


>ref|XP_002509971.1| conserved hypothetical protein [Ricinus communis]
           gi|223549870|gb|EEF51358.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 570

 Score =  112 bits (280), Expect = 5e-23
 Identities = 64/135 (47%), Positives = 91/135 (67%), Gaps = 8/135 (5%)
 Frame = -2

Query: 383 SRFRNFKAHASFAEQGGSNM--------LSDELLSRISSAKEADEALVMIAEKVESNEGV 228
           SR  + K+ AS +E  GS++         +++ L+R+SS+++ADEAL +I+E      G+
Sbjct: 49  SRSFSSKSKASLSEDNGSSIPVPDLLLSANEDSLARLSSSRDADEALQLISEISGRRSGL 108

Query: 227 VSSEDCCLIIKGAFESNNAELALSVYSAMRMSFFDQGLSENGSFVRRWKWARPDVRIYAA 48
           VS  D C II  A + NNA+LALS++ +MR S FDQG+SENG     WKW+RPDV +Y  
Sbjct: 109 VSISDSCAIITAALDRNNADLALSIFYSMRSS-FDQGVSENG-----WKWSRPDVSVYTL 162

Query: 47  LV*GLASSLQVSDAI 3
           LV GLAS+L+VSDA+
Sbjct: 163 LVQGLASALKVSDAL 177


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