BLASTX nr result
ID: Coptis24_contig00033280
seq
BLASTX 2.2.25 [Feb-01-2011] Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), "Gapped BLAST and PSI-BLAST: a new generation of protein database search programs", Nucleic Acids Res. 25:3389-3402. Query= Coptis24_contig00033280 (481 letters) Database: ./nr 23,641,837 sequences; 8,123,359,852 total letters Searching..................................................done Score E Sequences producing significant alignments: (bits) Value ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i... 103 1e-20 ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i... 103 1e-20 ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352... 99 5e-19 ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-l... 96 3e-18 ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2... 96 3e-18 >ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis vinifera] Length = 549 Score = 103 bits (258), Expect = 1e-20 Identities = 50/74 (67%), Positives = 61/74 (82%) Frame = +3 Query: 3 CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182 CLRAV N LLQGSS+ETF+I G+++SEAV EAKMSQ++SFL ++WLEGI+LE RLF M Sbjct: 475 CLRAVNNSLLQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGM 534 Query: 183 QIALWLLSFTKLLS 224 QIALWLL K L+ Sbjct: 535 QIALWLLQVRKALT 548 >ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis vinifera] gi|297736618|emb|CBI25489.3| unnamed protein product [Vitis vinifera] Length = 538 Score = 103 bits (258), Expect = 1e-20 Identities = 50/74 (67%), Positives = 61/74 (82%) Frame = +3 Query: 3 CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182 CLRAV N LLQGSS+ETF+I G+++SEAV EAKMSQ++SFL ++WLEGI+LE RLF M Sbjct: 464 CLRAVNNSLLQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGM 523 Query: 183 QIALWLLSFTKLLS 224 QIALWLL K L+ Sbjct: 524 QIALWLLQVRKALT 537 >ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1| ATATH9, putative [Ricinus communis] Length = 549 Score = 98.6 bits (244), Expect = 5e-19 Identities = 50/75 (66%), Positives = 58/75 (77%) Frame = +3 Query: 3 CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182 CLRAV N LLQG S+ETF I G++SSEAVIEAK Q+KSFLS IWLE I+LE RL +M Sbjct: 473 CLRAVNNSLLQGYSLETFFIIGKVSSEAVIEAKKLQRKSFLSRLDIWLEEILLEARLLAM 532 Query: 183 QIALWLLSFTKLLSG 227 QIALWLL + L+G Sbjct: 533 QIALWLLQVRRALTG 547 >ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-like [Cucumis sativus] Length = 538 Score = 95.9 bits (237), Expect = 3e-18 Identities = 45/73 (61%), Positives = 57/73 (78%) Frame = +3 Query: 3 CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182 CLRAV NCLLQGSS+ETFLI G++SSEAVIEAK+S+ KS + WL+ ++LE R F++ Sbjct: 464 CLRAVNNCLLQGSSLETFLIIGKVSSEAVIEAKLSENKSLTCWLNAWLDEVMLEARFFTL 523 Query: 183 QIALWLLSFTKLL 221 Q+ALWLL K L Sbjct: 524 QLALWLLHLKKAL 536 >ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1| predicted protein [Populus trichocarpa] Length = 512 Score = 95.9 bits (237), Expect = 3e-18 Identities = 48/75 (64%), Positives = 58/75 (77%) Frame = +3 Query: 3 CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182 CLR+V +CLLQGSSVETF I G++SSEAV+EAK Q+KS LS + LE I+LEVRL M Sbjct: 438 CLRSVNSCLLQGSSVETFFIIGKVSSEAVVEAKKLQRKSLLSRLDVLLEEILLEVRLLGM 497 Query: 183 QIALWLLSFTKLLSG 227 QIALWLL + L+G Sbjct: 498 QIALWLLHLRRALTG 512