BLASTX nr result

ID: Coptis24_contig00033280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033280
         (481 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 i...   103   1e-20
ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 i...   103   1e-20
ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|22352...    99   5e-19
ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-l...    96   3e-18
ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|2...    96   3e-18

>ref|XP_003633439.1| PREDICTED: putative ABC1 protein At2g40090 isoform 2 [Vitis
           vinifera]
          Length = 549

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182
           CLRAV N LLQGSS+ETF+I G+++SEAV EAKMSQ++SFL   ++WLEGI+LE RLF M
Sbjct: 475 CLRAVNNSLLQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGM 534

Query: 183 QIALWLLSFTKLLS 224
           QIALWLL   K L+
Sbjct: 535 QIALWLLQVRKALT 548


>ref|XP_002270951.1| PREDICTED: putative ABC1 protein At2g40090 isoform 1 [Vitis
           vinifera] gi|297736618|emb|CBI25489.3| unnamed protein
           product [Vitis vinifera]
          Length = 538

 Score =  103 bits (258), Expect = 1e-20
 Identities = 50/74 (67%), Positives = 61/74 (82%)
 Frame = +3

Query: 3   CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182
           CLRAV N LLQGSS+ETF+I G+++SEAV EAKMSQ++SFL   ++WLEGI+LE RLF M
Sbjct: 464 CLRAVNNSLLQGSSLETFMIIGKVASEAVAEAKMSQRRSFLCWINVWLEGILLEARLFGM 523

Query: 183 QIALWLLSFTKLLS 224
           QIALWLL   K L+
Sbjct: 524 QIALWLLQVRKALT 537


>ref|XP_002533645.1| ATATH9, putative [Ricinus communis] gi|223526458|gb|EEF28733.1|
           ATATH9, putative [Ricinus communis]
          Length = 549

 Score = 98.6 bits (244), Expect = 5e-19
 Identities = 50/75 (66%), Positives = 58/75 (77%)
 Frame = +3

Query: 3   CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182
           CLRAV N LLQG S+ETF I G++SSEAVIEAK  Q+KSFLS   IWLE I+LE RL +M
Sbjct: 473 CLRAVNNSLLQGYSLETFFIIGKVSSEAVIEAKKLQRKSFLSRLDIWLEEILLEARLLAM 532

Query: 183 QIALWLLSFTKLLSG 227
           QIALWLL   + L+G
Sbjct: 533 QIALWLLQVRRALTG 547


>ref|XP_004166850.1| PREDICTED: putative ABC1 protein At2g40090-like [Cucumis sativus]
          Length = 538

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 45/73 (61%), Positives = 57/73 (78%)
 Frame = +3

Query: 3   CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182
           CLRAV NCLLQGSS+ETFLI G++SSEAVIEAK+S+ KS     + WL+ ++LE R F++
Sbjct: 464 CLRAVNNCLLQGSSLETFLIIGKVSSEAVIEAKLSENKSLTCWLNAWLDEVMLEARFFTL 523

Query: 183 QIALWLLSFTKLL 221
           Q+ALWLL   K L
Sbjct: 524 QLALWLLHLKKAL 536


>ref|XP_002311218.1| predicted protein [Populus trichocarpa] gi|222851038|gb|EEE88585.1|
           predicted protein [Populus trichocarpa]
          Length = 512

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/75 (64%), Positives = 58/75 (77%)
 Frame = +3

Query: 3   CLRAVTNCLLQGSSVETFLITGRISSEAVIEAKMSQKKSFLSGFSIWLEGIVLEVRLFSM 182
           CLR+V +CLLQGSSVETF I G++SSEAV+EAK  Q+KS LS   + LE I+LEVRL  M
Sbjct: 438 CLRSVNSCLLQGSSVETFFIIGKVSSEAVVEAKKLQRKSLLSRLDVLLEEILLEVRLLGM 497

Query: 183 QIALWLLSFTKLLSG 227
           QIALWLL   + L+G
Sbjct: 498 QIALWLLHLRRALTG 512


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