BLASTX nr result

ID: Coptis24_contig00033257 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033257
         (602 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI30540.3| unnamed protein product [Vitis vinifera]              121   1e-25
ref|XP_002268102.1| PREDICTED: UPF0161 protein At3g09310-like [V...   121   1e-25
ref|XP_004142065.1| PREDICTED: UPF0161 protein At3g09310-like [C...   120   1e-25
ref|XP_002530986.1| conserved hypothetical protein [Ricinus comm...   120   2e-25
ref|XP_002323507.1| predicted protein [Populus trichocarpa] gi|2...   119   5e-25

>emb|CBI30540.3| unnamed protein product [Vitis vinifera]
          Length = 140

 Score =  121 bits (303), Expect = 1e-25
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = -1

Query: 602 NSCRYVPTCSEYSMEAYKRYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEGKIPPEQ 426
           NSCRYVPTCSEYSMEAYK+YGV KGT+LT WRLCRCNPLGGSGFDPPRWFDEG  PPE+
Sbjct: 83  NSCRYVPTCSEYSMEAYKKYGVVKGTVLTTWRLCRCNPLGGSGFDPPRWFDEGP-PPEK 140


>ref|XP_002268102.1| PREDICTED: UPF0161 protein At3g09310-like [Vitis vinifera]
          Length = 143

 Score =  121 bits (303), Expect = 1e-25
 Identities = 52/59 (88%), Positives = 55/59 (93%)
 Frame = -1

Query: 602 NSCRYVPTCSEYSMEAYKRYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEGKIPPEQ 426
           NSCRYVPTCSEYSMEAYK+YGV KGT+LT WRLCRCNPLGGSGFDPPRWFDEG  PPE+
Sbjct: 86  NSCRYVPTCSEYSMEAYKKYGVVKGTVLTTWRLCRCNPLGGSGFDPPRWFDEGP-PPEK 143


>ref|XP_004142065.1| PREDICTED: UPF0161 protein At3g09310-like [Cucumis sativus]
           gi|449520217|ref|XP_004167130.1| PREDICTED: UPF0161
           protein At3g09310-like [Cucumis sativus]
          Length = 152

 Score =  120 bits (302), Expect = 1e-25
 Identities = 50/56 (89%), Positives = 55/56 (98%)
 Frame = -1

Query: 602 NSCRYVPTCSEYSMEAYKRYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEGKIP 435
           NSCRY+PTCSEYSM+AYK+YGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDE ++P
Sbjct: 93  NSCRYLPTCSEYSMQAYKKYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEERLP 148


>ref|XP_002530986.1| conserved hypothetical protein [Ricinus communis]
           gi|223529438|gb|EEF31398.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 175

 Score =  120 bits (301), Expect = 2e-25
 Identities = 52/59 (88%), Positives = 56/59 (94%)
 Frame = -1

Query: 602 NSCRYVPTCSEYSMEAYKRYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEGKIPPEQ 426
           NSCRYVPTCSEYSM AYK+YGV KGT+LTAWRLCRCNPLGGSGFDPPRWFDE KIPP++
Sbjct: 118 NSCRYVPTCSEYSMIAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPPRWFDE-KIPPQE 175


>ref|XP_002323507.1| predicted protein [Populus trichocarpa] gi|222868137|gb|EEF05268.1|
           predicted protein [Populus trichocarpa]
          Length = 97

 Score =  119 bits (297), Expect = 5e-25
 Identities = 53/61 (86%), Positives = 55/61 (90%)
 Frame = -1

Query: 602 NSCRYVPTCSEYSMEAYKRYGVAKGTILTAWRLCRCNPLGGSGFDPPRWFDEGKIPPEQ* 423
           NSCRYVPTCSEYSMEAYK+YGV KGT+LTAWRLCRCNPLGGSGFDPPRWFDE   PP Q 
Sbjct: 39  NSCRYVPTCSEYSMEAYKKYGVVKGTVLTAWRLCRCNPLGGSGFDPPRWFDED--PPFQE 96

Query: 422 E 420
           E
Sbjct: 97  E 97


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