BLASTX nr result

ID: Coptis24_contig00033251 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033251
         (333 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|2...    86   3e-15
gb|ABK95862.1| unknown [Populus trichocarpa]                           86   3e-15
emb|CAN70591.1| hypothetical protein VITISV_026735 [Vitis vinifera]    85   7e-15
ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242...    83   2e-14
gb|AAX92894.1| Similar to At1g55140 [Oryza sativa Japonica Group...    83   3e-14

>ref|XP_002329052.1| predicted protein [Populus trichocarpa] gi|222839723|gb|EEE78046.1|
           predicted protein [Populus trichocarpa]
          Length = 246

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/62 (67%), Positives = 53/62 (85%)
 Frame = -3

Query: 331 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASNRLIMEEPQN 152
           S KTRT +R GVAVYNRASSLETLVG+LYLTN +RLE++M+KLGF+T +S ++I EE  +
Sbjct: 183 STKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSSTQMIPEEENS 242

Query: 151 KS 146
           KS
Sbjct: 243 KS 244


>gb|ABK95862.1| unknown [Populus trichocarpa]
          Length = 246

 Score = 85.9 bits (211), Expect = 3e-15
 Identities = 42/62 (67%), Positives = 53/62 (85%)
 Frame = -3

Query: 331 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASNRLIMEEPQN 152
           S KTRT +R GVAVYNRASSLETLVG+LYLTN +RLE++M+KLGF+T +S ++I EE  +
Sbjct: 183 STKTRTKRRVGVAVYNRASSLETLVGFLYLTNVSRLEEVMLKLGFSTDSSTQMIPEEENS 242

Query: 151 KS 146
           KS
Sbjct: 243 KS 244


>emb|CAN70591.1| hypothetical protein VITISV_026735 [Vitis vinifera]
          Length = 234

 Score = 84.7 bits (208), Expect = 7e-15
 Identities = 43/61 (70%), Positives = 51/61 (83%)
 Frame = -3

Query: 331 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASNRLIMEEPQN 152
           S KTRT KRAGVAVYNRASSLETLVGYLYLT+  RLE++M KLGF+T AS +L ++E  +
Sbjct: 168 SAKTRTKKRAGVAVYNRASSLETLVGYLYLTDVNRLEEVMRKLGFSTDASTQLGLQETDS 227

Query: 151 K 149
           K
Sbjct: 228 K 228


>ref|XP_002279256.1| PREDICTED: uncharacterized protein LOC100242891 [Vitis vinifera]
           gi|297743076|emb|CBI35943.3| unnamed protein product
           [Vitis vinifera]
          Length = 233

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 43/62 (69%), Positives = 50/62 (80%)
 Frame = -3

Query: 331 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASNRLIMEEPQN 152
           S KTRT KRAGVAVYNRASSLETLVGYLYLT+  RLE++M KLGF+T AS +L ++E   
Sbjct: 172 SAKTRTKKRAGVAVYNRASSLETLVGYLYLTDVNRLEEVMRKLGFSTDASTQLGLQETDT 231

Query: 151 KS 146
            S
Sbjct: 232 GS 233


>gb|AAX92894.1| Similar to At1g55140 [Oryza sativa Japonica Group]
           gi|77549501|gb|ABA92298.1| RNase3 domain containing
           protein, expressed [Oryza sativa Japonica Group]
           gi|215769356|dbj|BAH01585.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 172

 Score = 82.8 bits (203), Expect = 3e-14
 Identities = 41/57 (71%), Positives = 48/57 (84%)
 Frame = -3

Query: 331 SGKTRTTKRAGVAVYNRASSLETLVGYLYLTNATRLEDLMVKLGFTTAASNRLIMEE 161
           S KTRT KRAG+AVYNRASSLETL+GYLYLTN  RLE LM +LGFT+ AS++ I +E
Sbjct: 94  SSKTRTRKRAGIAVYNRASSLETLIGYLYLTNFKRLEQLMFQLGFTSGASSQHIADE 150


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