BLASTX nr result

ID: Coptis24_contig00033249 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033249
         (382 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    61   8e-08
ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumi...    61   8e-08

>ref|XP_004154592.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 458

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/51 (49%), Positives = 38/51 (74%)
 Frame = +1

Query: 184 WIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 336
           W+IKVEED   +I + +PLS+++  P PK FPK LN+L+F +  +C+EY+L
Sbjct: 85  WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135


>ref|XP_004140043.1| PREDICTED: F-box protein SKIP23-like [Cucumis sativus]
          Length = 404

 Score = 61.2 bits (147), Expect = 8e-08
 Identities = 25/51 (49%), Positives = 38/51 (74%)
 Frame = +1

Query: 184 WIIKVEEDTPNVIHLMDPLSRNFMSPKPKTFPKGLNVLDFNIYGICKEYLL 336
           W+IKVEED   +I + +PLS+++  P PK FPK LN+L+F +  +C+EY+L
Sbjct: 85  WLIKVEEDACGMIKISNPLSKSYFKPLPKNFPKVLNLLNFPVLELCQEYVL 135


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