BLASTX nr result

ID: Coptis24_contig00033226 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Coptis24_contig00033226
         (271 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002527108.1| conserved hypothetical protein [Ricinus comm...   145   3e-33
ref|XP_003548962.1| PREDICTED: uncharacterized protein LOC100806...   144   7e-33
ref|XP_003519970.1| PREDICTED: uncharacterized protein LOC100798...   143   1e-32
ref|XP_003619027.1| Programmed cell death protein [Medicago trun...   140   1e-31
ref|XP_002264439.1| PREDICTED: uncharacterized protein LOC100249...   140   1e-31

>ref|XP_002527108.1| conserved hypothetical protein [Ricinus communis]
           gi|223533531|gb|EEF35271.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 704

 Score =  145 bits (367), Expect = 3e-33
 Identities = 71/90 (78%), Positives = 80/90 (88%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPPQHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERILRCWG 91
           EDLAMFLARAVVDEVL PQHLEEIG++  G +SI SKV QMA+SLL+ RLS ERILRCWG
Sbjct: 504 EDLAMFLARAVVDEVLAPQHLEEIGSQFLGLESIGSKVLQMAKSLLKARLSGERILRCWG 563

Query: 90  GGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
           G GSS+PGWA+EDVKDKI KLLEE+ESGG+
Sbjct: 564 GAGSSRPGWAVEDVKDKIGKLLEEFESGGD 593


>ref|XP_003548962.1| PREDICTED: uncharacterized protein LOC100806217 [Glycine max]
          Length = 704

 Score =  144 bits (363), Expect = 7e-33
 Identities = 70/90 (77%), Positives = 77/90 (85%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPPQHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERILRCWG 91
           EDLAMFLARAVVDEVL PQHLEEIGT+C G  S+ SKV +M +SLL+ RL+ ERILRCWG
Sbjct: 505 EDLAMFLARAVVDEVLAPQHLEEIGTQCLGPGSVGSKVLRMTKSLLKARLAGERILRCWG 564

Query: 90  GGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
           GGGSS+ GWA EDVKD I KLLEEYESGGE
Sbjct: 565 GGGSSRSGWAFEDVKDMIGKLLEEYESGGE 594


>ref|XP_003519970.1| PREDICTED: uncharacterized protein LOC100798465 [Glycine max]
          Length = 908

 Score =  143 bits (361), Expect = 1e-32
 Identities = 71/90 (78%), Positives = 76/90 (84%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPPQHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERILRCWG 91
           EDLAMFLARAVVDEVL PQHLEEIG +  G  SI SKV QM +SLL+ RL+ ERILRCWG
Sbjct: 709 EDLAMFLARAVVDEVLAPQHLEEIGAQSLGPGSIGSKVLQMTKSLLKARLAGERILRCWG 768

Query: 90  GGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
           GGGSS+PGWA EDVKD I KLLEEYESGGE
Sbjct: 769 GGGSSRPGWAFEDVKDMIGKLLEEYESGGE 798



 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 34/94 (36%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPP----QHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERIL 103
           E LA+F+ARAVVD++LPP    +H+  +     G + ++    +  +S L   L +E I 
Sbjct: 410 EVLALFIARAVVDDILPPAFLKKHMAYLPKDSKGVEVLK----KTEKSYLAAPLHAEIIE 465

Query: 102 RCWGGGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
           RCWGG  ++     ++DVK KI   L+EY   G+
Sbjct: 466 RCWGGSKNT----TVDDVKAKINNFLKEYVGSGD 495


>ref|XP_003619027.1| Programmed cell death protein [Medicago truncatula]
           gi|355494042|gb|AES75245.1| Programmed cell death
           protein [Medicago truncatula]
          Length = 710

 Score =  140 bits (353), Expect = 1e-31
 Identities = 71/92 (77%), Positives = 78/92 (84%), Gaps = 2/92 (2%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPPQHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERILRCW- 94
           EDLAMFLAR+VVDEVL PQ LE+IGT+C   DSI SKV QMA+SLL+ RL+ ERILRCW 
Sbjct: 512 EDLAMFLARSVVDEVLAPQQLEDIGTQCISQDSIGSKVLQMAKSLLKARLAGERILRCWG 571

Query: 93  -GGGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
            GGGGSSKPGW IEDVKD I KLLEEYESGG+
Sbjct: 572 GGGGGSSKPGWEIEDVKDMIGKLLEEYESGGD 603


>ref|XP_002264439.1| PREDICTED: uncharacterized protein LOC100249422 [Vitis vinifera]
          Length = 725

 Score =  140 bits (352), Expect = 1e-31
 Identities = 70/90 (77%), Positives = 76/90 (84%)
 Frame = -2

Query: 270 EDLAMFLARAVVDEVLPPQHLEEIGTRCTGTDSIRSKVFQMARSLLQPRLSSERILRCWG 91
           EDLAMFLARAVVDEVL PQHLEEIG++C   DSI SKV QMA+SLL+ RLS ERILRCWG
Sbjct: 525 EDLAMFLARAVVDEVLAPQHLEEIGSQCLSPDSIGSKVLQMAKSLLKARLSGERILRCWG 584

Query: 90  GGGSSKPGWAIEDVKDKIEKLLEEYESGGE 1
           GGGS     A+EDVKDKI KLLEEYESGG+
Sbjct: 585 GGGSGSTARAVEDVKDKIGKLLEEYESGGD 614


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